Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi542g00006 ATGCCTGTGACAGACTTTAATGATGCGCAAAATTTTGATGATAGCATTCTTTTCCCTGTTGAAGAGATAGTACAATACCCATTGCCTGGATATATATCACCATCTTCAATAAGTTTCAGTCCCGATGATAGTTTGATTTCTTATTTGTTTAGTCCTGATCACACATTAAACAGAAAGATTTTTGCTTTTAATCTGAAGACCAATACACAAGAATTGTTATTCAGTCCCTCTGATGGTGGACTTGATGAGAGTAATATTTCTCCAGAAGAAAAGTTGAGAAGGGAGAGGTTGAGGGAGCGTGGGTTAGGAGTGACTCGGTACGAATGGGTGAAGACAAACTCAAAAAGAAAAGCAGTCATAGTGCCCTTGCCTGCTGGGATTTATATCCAGGACATTTCCCATTCAAAAGCAGAGCTCAAGCTTCCAAGTATATTAGGTTCACCCATTCTCGATCCACATCTGTCTCCTGATGGATCAATGCTTGCTTATGTACAAGACTGTGAGTTGCACGTTCTGAATCTCTTGTCTAATGAATCAAACCAGTTGACCCATGGTGCGCAGGAAAATGGTTTGATTCGTGGGCTTGCCGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTCACTGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGTAAGAGCTCAGTTGGTTTAGAGGCACAGGAAGACCATCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTTCGGTAGCTGGAGGTTCCATCACTTGGATGGACCTTCTCTGTGGGGGCATGGAACAGCAAAACTATGAGGAGGAATATTTGGCTAGAGTCAGTTGGGTGCATGGAAACATTCTCACTGCTCAGATCTTGAACAGGCACCACACTAAAATAAATATCCTCAAGTTTGATATTAGAACAGGACAAAGGAAAAATTTATTGGTGGAAGAAAACAGCACTTGGATCAATATACATGACTGTTTCACACCTCTTGATAAAGGAGTTACCAAGTTTTCGGGTGGATTTATCTGGGCTAGTGAGAAAACAGGATTTAGACATCTTTATCTTCATAATGCAAATGGGACTTGTTTGGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATAGCTGGTGTGAATGAGGCAACAGGTCTAGTATATTTTACTGGGACCTTAGATGGTCCTCTAGAGACCAACTTATATTGTGCTAAACTTTTTGTTGATGGAAGTCAACCACTTCAGGCCCCTGTCAGACTTACACATGGCAAGGGGAAGCACATTGTGGTCCTTGATCATCATATGCGAAACTTTGTTGATATCCATGATTCCCTTGATTGTCCTCCTAGGGTGTTACTTTGCTCATTAGACGATGGAAACATAATCATGCCTTTATATGAACAGTCATTTACAATTCCAAGACTCAAAAAGCTTCAACTTGAGCCACCAGAGATTGTTGAAATACAGGCTGACGATGGCACTACATTGTATGGAGCTCTATATAAGCCTGATGCTTCAAGATTCGGACCTCCACCTTACAAAACCATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTTTGTGACTCTTGGCTTAATACAGTTGACCTGAGAGCACAGTACTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCTAGACGGGGGTTGAAGTTTGAAAGTTGTTTAAAGCACAGACTTGGTCAAATTGATGCTGATGATCAGCTAACTGGAGCAGAATGGCTTATCAAACAAGGGCTTGCAAAAGCTGGTCACATCGGGTTGTATGGGTGGAGCTATGGCGGTTATCTCTCTGCAATGACCTTATCAAGATACCCAGATTTCTTCAAGTGTGCTGTAGCTGGTGCACCTGTTACATCATGGGATGGATATGACACATTTTACACAGAGAAGTACATGGGGTTGCCATCTGAAAATCAATTAGGGTATGAAAGCGGTTCTGTTATGAACCAAGTGCACCAGTTGAAAGGACGGTTGTTGCTTGTGCATGGTATGATTGATGAGAATGTACATTTTAGGCACACTGCAAGGCTTATCAATGCACTTGTGGCAGCTGGAAAACCTTATGAGCTAATGATTTTCCCAGATGAGCGTCACATGCCGCGCCGCCATAGAGATCGAGTTTATATGGAAGAGAGGATATGGGACTTCATAGCCAGGAATCTGTAA 2265 0.4181 MPVTDFNDAQNFDDSILFPVEEIVQYPLPGYISPSSISFSPDDSLISYLFSPDHTLNRKIFAFNLKTNTQELLFSPSDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTNSKRKAVIVPLPAGIYIQDISHSKAELKLPSILGSPILDPHLSPDGSMLAYVQDCELHVLNLLSNESNQLTHGAQENGLIRGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHPYPFAGASNVKVRLGVVSVAGGSITWMDLLCGGMEQQNYEEEYLARVSWVHGNILTAQILNRHHTKINILKFDIRTGQRKNLLVEENSTWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHNANGTCLGPITEGEWMVEQIAGVNEATGLVYFTGTLDGPLETNLYCAKLFVDGSQPLQAPVRLTHGKGKHIVVLDHHMRNFVDIHDSLDCPPRVLLCSLDDGNIIMPLYEQSFTIPRLKKLQLEPPEIVEIQADDGTTLYGALYKPDASRFGPPPYKTMINVYGGPSVQLVCDSWLNTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESCLKHRLGQIDADDQLTGAEWLIKQGLAKAGHIGLYGWSYGGYLSAMTLSRYPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQLGYESGSVMNQVHQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELMIFPDERHMPRRHRDRVYMEERIWDFIARNL 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi542g00006 754 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 122 468 IPR002469 GO:0006508
Gabi542g00006 754 Gene3D alpha/beta hydrolase 503 754 IPR029058 -
Gabi542g00006 754 Gene3D - 19 493 - -
Gabi542g00006 754 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 32 750 - -
Gabi542g00006 754 SUPERFAMILY alpha/beta-Hydrolases 501 754 IPR029058 -
Gabi542g00006 754 SUPERFAMILY DPP6 N-terminal domain-like 32 497 - -
Gabi542g00006 754 Pfam Prolyl oligopeptidase family 555 754 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi542g00006 Gabi-Chr542 24721 30332 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi542g00006 485 752 Carbohydrate Esterase AT5G36210 23.571 1.88e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi542g00006 K01278 - gmx:100812178 1413.67