Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi542g00003 ATGAACCAGGAGAGGAATCTGAAGCGTCCAAGATCACCGCCTTTCAAAATGCCTGTGACAGACTTTAATGATGCGCAAAATTTTGATGATAGCATTCTTTTCCCTGTTGAAGAGATAGTACAATACCCATTGCCTGGATATATATCACCATCTTCAATAAGTTTCAGTCCCGATGATAGTTTGATTTCTTATTTGTTTAGTCCTGATCACACATTAAACAGAAAGATTTTTGCTTTTAATCTGAAGACCAATACACAAGAATTGTTATTCAGTCCCTCTGATGGTGGACTTGATGAGAGTAATATTTCTCCAGAAGAAAAGTTGAGAAGGGAGAGGTTGAGGGAGCGTGGGTTAGGAGTGACTCGGTACGAATGGGTGAAGACAAACTCAAAAAGAAAAGCAGTCATAGTGCCCTTGCCTGCTGGGATTTATATCCAGGACATTTCCCATTCAAAAGCAGAGCTCAAGCTTCCAAGTATATTAGGTTCACCCATTCTCGATCCACATCTGTCTCCTGATGGATCAATGCTTGCTTATGTACAAGACTGTGAGTTGCACGTTCTGAATCTCTTGTCTAATGAATCAAACCAGTTGACCCATGGTGCGCAGGAAAATGGTTTGATTCGTGGGCTTGCCGAATATATAGCTCAGGAGGAGATGGATAGAAAAACTGGATATTGGTGGTCACTGGACAGTAAATATATTGCTTTCACTGAAGTTGATTCTTCTGAAATACCACTTTTTAGAATTATGCACCAAGGTAAGAGCTCAGTTGGTTTAGAGGCACAGGAAGACCATCCTTATCCTTTTGCAGGAGCTTCAAATGTTAAAGTGCGCCTTGGGGTTGTTTCGGTAGCTGGAGGTTCCATCACTTGGATGGACCTTCTCTGTGGGGGCATGGAACAGCAAAACTATGAGGAGGAATATTTGGCTAGAGTCAGTTGGGTGCATGGAAACATTCTCACTGCTCAGATCTTGAACAGGCACCACACTAAAATAAATATCCTCAAGTTTGATATTAGAACAGGACAAAGGAAAAATTTATTGGTGGAAGAAAACAGCACTTGGATCAATATACATGACTGTTTCACACCTCTTGATAAAGGAGTTACCAAGTTTTCGGGTGGATTTATCTGGGCTAGTGAGAAAACAGGATTTAGACATCTTTATCTTCATAATGCAAATGGGACTTGTTTGGGACCCATCACTGAAGGTGAATGGATGGTTGAGCAAATAGCTGGTGTGAATGAGGCAACAGGTCTAGTATATTTTACTGGGACCTTAGATGGTCCTCTAGAGACCAACTTATATTGTGCTAAACTTTTTGTTGATGGAAGTCAACCACTTCAGGCCCCTGTCAGACTTACACATGGCAAGGGGAAGCACATTGTGGTCCTTGATCATCATATGCGAAACTTTGTTGATATCCATGATTCCCTTGATTGTCCTCCTAGGGTGTTACTTTGCTCATTAGACGATGGAAACATAATCATGCCTTTATATGAACAGTCATTTACAATTCCAAGACTCAAAAAGCTTCAACTTGAGCCACCAGAGATTGTTGAAATACAGGCTGACGATGGCACTACATTGTATGGAGCTCTATATAAGCCTGATGCTTCAAGATTCGGACCTCCACCTTACAAAACCATGATCAATGTTTATGGTGGTCCAAGTGTACAGCTTGTTTGTGACTCTTGGCTTAATACAGTTGACCTGAGAGCACAGTACTTGAGAAACCAAGGCATCTTAGTTTGGAAGTTAGACAATAGAGGAACTGCTAGACGGGGGTTGAAGTTTGAAAGTTGTTTAAAGCACAGACTTGGTCAAATTGATGCTGATGATCAGCTAACTGGAGCAGAATGGCTTATCAAACAAGGGCTTGCAAAAGCTGGTCACATCGGGTTGTATGGGTGGAGCTATGGCGGTTATCTCTCTGCAATGACCTTATCAAGATACCCAGATTTCTTCAAGTGTGCTGTAGCTGGTGCACCTGTTACATCATGGGATGGATATGACACATTTTACACAGAGAAGTACATGGGGTTGCCATCTGAAAATCAATTAGGGTATGAAAGCGGTTCTGTTATGAACCAAGTGCACCAGTTGAAAGGACGGTTGTTGCTTGTGCATGGTATGATTGATGAGAATGTACATTTTAGGCACACTGCAAGGCTTATCAATGCACTTGTGGCAGCTGGAAAACCTTATGAGCTAATGATTTTCCCAGATGAGCGTCACATGCCGCGCCGCCATAGAGATCGAGTTTATATGGAAGAGAGGATATGGGACTTCATAGCCAGGAATCTGTAA 2313 0.4194 MNQERNLKRPRSPPFKMPVTDFNDAQNFDDSILFPVEEIVQYPLPGYISPSSISFSPDDSLISYLFSPDHTLNRKIFAFNLKTNTQELLFSPSDGGLDESNISPEEKLRRERLRERGLGVTRYEWVKTNSKRKAVIVPLPAGIYIQDISHSKAELKLPSILGSPILDPHLSPDGSMLAYVQDCELHVLNLLSNESNQLTHGAQENGLIRGLAEYIAQEEMDRKTGYWWSLDSKYIAFTEVDSSEIPLFRIMHQGKSSVGLEAQEDHPYPFAGASNVKVRLGVVSVAGGSITWMDLLCGGMEQQNYEEEYLARVSWVHGNILTAQILNRHHTKINILKFDIRTGQRKNLLVEENSTWINIHDCFTPLDKGVTKFSGGFIWASEKTGFRHLYLHNANGTCLGPITEGEWMVEQIAGVNEATGLVYFTGTLDGPLETNLYCAKLFVDGSQPLQAPVRLTHGKGKHIVVLDHHMRNFVDIHDSLDCPPRVLLCSLDDGNIIMPLYEQSFTIPRLKKLQLEPPEIVEIQADDGTTLYGALYKPDASRFGPPPYKTMINVYGGPSVQLVCDSWLNTVDLRAQYLRNQGILVWKLDNRGTARRGLKFESCLKHRLGQIDADDQLTGAEWLIKQGLAKAGHIGLYGWSYGGYLSAMTLSRYPDFFKCAVAGAPVTSWDGYDTFYTEKYMGLPSENQLGYESGSVMNQVHQLKGRLLLVHGMIDENVHFRHTARLINALVAAGKPYELMIFPDERHMPRRHRDRVYMEERIWDFIARNL 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi542g00003 770 Gene3D - 35 509 - -
Gabi542g00003 770 Coils Coil 767 770 - -
Gabi542g00003 770 Gene3D alpha/beta hydrolase 519 770 IPR029058 -
Gabi542g00003 770 Pfam Dipeptidyl peptidase IV (DPP IV) N-terminal region 138 484 IPR002469 GO:0006508
Gabi542g00003 770 PANTHER PROTEASE FAMILY S9B,C DIPEPTIDYL-PEPTIDASE IV-RELATED 48 766 - -
Gabi542g00003 770 Pfam Prolyl oligopeptidase family 571 770 IPR001375 GO:0006508|GO:0008236
Gabi542g00003 770 SUPERFAMILY DPP6 N-terminal domain-like 48 513 - -
Gabi542g00003 770 SUPERFAMILY alpha/beta-Hydrolases 517 770 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi542g00003 Gabi-Chr542 24721 30509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi542g00003 501 768 Carbohydrate Esterase AT5G36210 23.571 1.62e-12 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi542g00003 K01278 - gmx:100812178 1429.85