Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi537g00002 ATGAGAGGCTTTATCTTGCTTCTGTTCTGCCTCACCTTGCTGAATAATATAGCAGCCTTCACTGTTAGAGACACTATTAATACAATGCAATCTATCAATGATGGTGAGATCATAATTTCAGCTGGAGAAAGCTTTGCATTGGGATTCTTTAGTCCAAACAATTCCATGAACCGTTATGTTGGAATTTGGTATAATAAAATCCCAATAAAGACAGTAGTATGGGTTGCCAACAGAGACAACCCCATCACTGACTCATCAGGGGTTTTGAAGATCAATGAAACTGGGATTCTAGTCCTTCTCAACCATAACAAGAGTGTCATTTGGTCTTCCAATTCAACAAGGTCAGCGAAATATCCAGTTGCAAAGCTTTTAGATTCTGGAAATTTCATTGTTCAGGATAGCAGCAATAATGAGCCAACAGATTTTCTGTGGCAAAGTTTTGATTATCCACTTGACACACTCTTGCCAGGAATGAAGTTTGGAAGAAATCTAGTTACAGGCCTGAATAGATACTTGTCATCATGGAATAGCTCTGATGATCCATCTCATGGTAAATATAACTATCAACTTGATATTAGTGGATATCCACAATTTGTTTTAAGAGAAGGCACTGTAAAAAGGTTTCGTTTGGGATCATGGAATGGTGTTCAGTTTAGTGGGGCGCCTCAGGTGAAACAAAATGCTATATATAGGTTTATGTTTGTTTCTAATGAGGAAGAGATATATTATACATTTGAACTTTTCAACAAGTCATCTCTTAATAGGGTGGTGTTAACAACAGATGGATATATCAGGAAGATTTATTGGAGTGGAGAAGAAAATGGTTGGAGTGAATTTTCTAGAATGCCTTTGGATGACTGTGATTACTATGAAAAATGTGGAGCATATGCTAGTTGTAATATAAACAATTTTCCTGTATGTGATTGCTTGGATGGATTTGTGCAGCACAATGTGGCAGATATATATAGTGATTGTGTCAGGAGAACTTCACTGAGTTGCCATGGAGATGGGTTTTTGAAGTATTCTGGGCTGAAATTACCAGACACAGATGGATCCTGGTTTGATAGAAATATGAGCCTTGAAGATTGTAGGGTGTTGTGTCTGAAGAATTGTTCCTGTTCAGCATATACAGCTTTGGATATGAGTAAAGGGCCAAGTGGATGCTTACTCTGGTTTGGTAATCTGACTGACATAAAAGAATTGCCTGCATCTGATGAAGATGTTTACATAAGGATGGCTGGGACAGAAATAGGTAAGACTCATGAAGGAAAGCACTCACATAAATCCAACATCTGGAAGAAAGAGACTGTTATCATAAGCTGTGTGGCGCTTATAGGAATTTTAATCCTAAGCTTAACCTTCATCATTTATAGACGGCAGAAAGGCAAAGAAGGTAAAAGAAATGGTGAAGAAGATGCAAATGCAACAAATGAACACAATGAGGAAGATTCAGAATTACCCTTGTTTGATATGTCTACAATTACTTCTGCAACCAATAACTTTTCAACTGGCAATTTTCTTGGGGAAGGTGGTTTTGGATCGGGTATCCTGGACGATGGAAGAGAAATAGCTGTCAAGAGGCTCTCAAAGAAATCAAGCCAAGGAATCCAAGAATTCAAAAATGAAGTTTTGCATATTGCCAAACTTCAGCACAGGAATTTAGTGAGGCTACTAGGGTTCTGCATTCAAGCAGATGAAAGATTGCTGGTTTATGAATTTATGCCCAACAAAAGCTTGGACTTCTTCATATTCGATAAAAAGAAGGGCATGTTACTAGATTGGCCAAGGCGCTTGCACATTATCAATGGGATAGCTCGGGGTCTTCTTTATCTTCATCAAGATTCAAGGCACAGAATAGTTCATAGAGATCTCAAAGCCGCGAATGTTTTGCTAGATAGTGAAATGAACCCAAAAATCTCAGACTTTGGATTGGCTAGAAGCTTTGGAGGGAATGAAGTTGTAGGAAACACACAGCATGTGGTTGGAACCTATGGCTACCTGCCTCCAGAGTATATAATTGATGGAGCTTACTCAACAAAATCCGATGTGTTCAGCTTTGGTGTGTTGATATTGGAGATAGTGAGTGGGAAGAGAAATAAAGGGTTCTGTCATCAAGATAACCTTTTGTCTAATGCATGGAGACTATTTACTGAAGGCCAAAGCTCTGAAATAATTGATGCGACAATAAAAGACTCATTCAATTTACCTGCAGTGCTAAGATCAATTAATGTGGGACTACTATGTGTGCAAATAAGTCCAGATGATAGGCCAAGCATGTCATCTGTGGTTATGATGTTGAGTAGTGAATCCACACTGCCTCAGCCTAAAATGCCTGGATTCTTTAGAGATAAAGACCATGTTGGGGACAATTCTTCATCAAGCAGTAATAAACTTTGCTCAAATGATATCACAGTCAGCTTAATGTATGCTCGATAG 2436 0.3851 MRGFILLLFCLTLLNNIAAFTVRDTINTMQSINDGEIIISAGESFALGFFSPNNSMNRYVGIWYNKIPIKTVVWVANRDNPITDSSGVLKINETGILVLLNHNKSVIWSSNSTRSAKYPVAKLLDSGNFIVQDSSNNEPTDFLWQSFDYPLDTLLPGMKFGRNLVTGLNRYLSSWNSSDDPSHGKYNYQLDISGYPQFVLREGTVKRFRLGSWNGVQFSGAPQVKQNAIYRFMFVSNEEEIYYTFELFNKSSLNRVVLTTDGYIRKIYWSGEENGWSEFSRMPLDDCDYYEKCGAYASCNINNFPVCDCLDGFVQHNVADIYSDCVRRTSLSCHGDGFLKYSGLKLPDTDGSWFDRNMSLEDCRVLCLKNCSCSAYTALDMSKGPSGCLLWFGNLTDIKELPASDEDVYIRMAGTEIGKTHEGKHSHKSNIWKKETVIISCVALIGILILSLTFIIYRRQKGKEGKRNGEEDANATNEHNEEDSELPLFDMSTITSATNNFSTGNFLGEGGFGSGILDDGREIAVKRLSKKSSQGIQEFKNEVLHIAKLQHRNLVRLLGFCIQADERLLVYEFMPNKSLDFFIFDKKKGMLLDWPRRLHIINGIARGLLYLHQDSRHRIVHRDLKAANVLLDSEMNPKISDFGLARSFGGNEVVGNTQHVVGTYGYLPPEYIIDGAYSTKSDVFSFGVLILEIVSGKRNKGFCHQDNLLSNAWRLFTEGQSSEIIDATIKDSFNLPAVLRSINVGLLCVQISPDDRPSMSSVVMMLSSESTLPQPKMPGFFRDKDHVGDNSSSSSNKLCSNDITVSLMYAR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi537g00002 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 573 - -
Gabi537g00002 811 CDD STKc_IRAK 507 766 - -
Gabi537g00002 811 Gene3D - 18 147 IPR036426 -
Gabi537g00002 811 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Gabi537g00002 811 Pfam Protein kinase domain 503 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi537g00002 811 SUPERFAMILY Protein kinase-like (PK-like) 482 776 IPR011009 -
Gabi537g00002 811 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Gabi537g00002 811 Pfam D-mannose binding lectin 71 175 IPR001480 -
Gabi537g00002 811 CDD PAN_AP_plant 329 413 - -
Gabi537g00002 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Gabi537g00002 811 CDD B_lectin 29 150 IPR001480 -
Gabi537g00002 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 181 IPR036426 -
Gabi537g00002 811 MobiDBLite consensus disorder prediction 465 484 - -
Gabi537g00002 811 ProSiteProfiles PAN/Apple domain profile. 333 413 IPR003609 -
Gabi537g00002 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 757 - -
Gabi537g00002 811 SMART ntp_6 333 412 IPR003609 -
Gabi537g00002 811 Gene3D Phosphorylase Kinase; domain 1 474 573 - -
Gabi537g00002 811 SMART serkin_6 501 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi537g00002 811 Gene3D Hepatocyte Growth Factor 331 410 - -
Gabi537g00002 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 147 - -
Gabi537g00002 811 SMART blect_4 29 150 IPR001480 -
Gabi537g00002 811 PIRSF SRK 1 811 IPR024171 GO:0004674
Gabi537g00002 811 Pfam Domain of unknown function (DUF3403) 767 811 IPR021820 GO:0004674
Gabi537g00002 811 Pfam PAN-like domain 333 398 IPR003609 -
Gabi537g00002 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 774 - -
Gabi537g00002 811 ProSiteProfiles Protein kinase domain profile. 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi537g00002 811 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi537g00002 Gabi-Chr537 44443 61477 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi537g00002 357 806 Receptor kinase-like Gene Family AT4G23220 43.671 4.84e-118 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gabi537g00002 Pkinase 5.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi537g00002 - - gmx:100795006 1196.42