Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi532g00002 ATGCAAGAAAATGCACTCAATAATATACCACCTGGTTACAAGTTCTATCCTGATGATGTTGAATTGATCGAGTTTTATTTGAAGCCAAAAATTGCTGGTCATATCATAAATCCTGGCCGGATTCATCATGTTGACATTTACATGCATTCTCCTCAAGAACTAAATGATACATATAAATACAAAGGAGAGGAACATACATACTATTTTACTCCAAGAAGCAAGAAATACCCTAATGGAAAACGTCCTAATCGCGCTACTGGAGACTTTGGTTTTTGGAAAGCTACTGGAAAAGAGAATCCAATAATAAGCAATAACACTGTAATTGGAAATAGACGGACTTTGGTTTTTTACCAAAAAAAACCTACAGATGCAGTGAAAGAAGCAGTGAAAACCAATTGGATTATGCAAGAGTTCACAATTAACAAAGACAAGAATCTTGCAAGTTCAAGTACAACTCCTCCTTGTAAGTTACTGAATAATGTTTCATTTATTGTTCACCTACCAGTTCTCTATGATTCTCAGATGCTGTTGGATGATTGGGTTCTATGTAAGATTTACCAGACTAAGCATGAGAAGGAAAGACAAACAAATGTTGTTGCCACTCCAGAATGTCAACCCGATCAACTTTTTCAGGCTCAACAGATGCAAACTCGCATGTCCACGAATGTGGTTGCTACTCGACAGTTTGAACCCAACCAAGCTGCTCCAGCTATACAACCTCACTTGTCCACCGATCTAGTTCCCACTTTAGAGTGTCATGCCAATCAAAATTCCCAAGCTCATTATATGCAAAATTCCTTTTCCTCTTCATTCACTTGTCCAGGTAGTAGCATGCCCCAAAATTCATTTATTCCTCCTCATTCTTCACTTCCATTACAATCACTTGATGATTCGTTGGAGCTAGTTGAGACTCATGTGGTTGCCACTCCACAATGTCAACCAAATCAACCTTCTAAGTCTCAGTTTATAGAAAATCCCCAAAACTCATTTATTCCTTCCTATTGTTCACTTCCTCCTCCTATGCGATCAGGGGATTTCTATGGTTCTTGTGAGCAAAAGGACTTTAATGATGTTGATACCTATGTGGCTGCCACAAATGTGGTTGTTACTCCACCGTTTCAAGGCAATTTTTATTCTCAGGTTCAAAATATGCAAATGTCCTTTTCTCCTTCTTCCCCTTCCTTAGGTAGTTGTATATTCCAAAACTCGGTTATTCCTCCTGATTCTCAATTTCCTGTGCAAACATCGGATAATGAGTACTATAATGCGTATGAGTGCATAAGCTTCGATGATACTGATGCACATTTTTGA 1311 0.3829 MQENALNNIPPGYKFYPDDVELIEFYLKPKIAGHIINPGRIHHVDIYMHSPQELNDTYKYKGEEHTYYFTPRSKKYPNGKRPNRATGDFGFWKATGKENPIISNNTVIGNRRTLVFYQKKPTDAVKEAVKTNWIMQEFTINKDKNLASSSTTPPCKLLNNVSFIVHLPVLYDSQMLLDDWVLCKIYQTKHEKERQTNVVATPECQPDQLFQAQQMQTRMSTNVVATRQFEPNQAAPAIQPHLSTDLVPTLECHANQNSQAHYMQNSFSSSFTCPGSSMPQNSFIPPHSSLPLQSLDDSLELVETHVVATPQCQPNQPSKSQFIENPQNSFIPSYCSLPPPMRSGDFYGSCEQKDFNDVDTYVAATNVVVTPPFQGNFYSQVQNMQMSFSPSSPSLGSCIFQNSVIPPDSQFPVQTSDNEYYNAYECISFDDTDAHF 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi532g00002 436 Gene3D NAC domain 19 193 IPR036093 GO:0003677|GO:0006355
Gabi532g00002 436 PANTHER NAC TRANSCRIPTION FACTOR 56 9 251 - -
Gabi532g00002 436 SUPERFAMILY NAC domain 7 188 IPR036093 GO:0003677|GO:0006355
Gabi532g00002 436 Pfam No apical meristem (NAM) protein 10 139 IPR003441 GO:0003677|GO:0006355
Gabi532g00002 436 ProSiteProfiles NAC domain profile. 9 188 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi532g00002 Gabi-Chr532 13207 16244 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi532g00002 8 194 NAC Transcription Factor Family AT5G08790 40.107 6.58e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gabi532g00002 NAM 1.6e-26 No_clan