Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi529g00003 ATGCTATTTCCTAGATCATTACTTGCATTCTTTTTGGTGAAAACTTGGCAAGGAGAATTCTCAGATGAGGAAGACAGAATAATTTGCAGCCTTTATGCTAATATTGGAAGCAGGTGGTCAATTATAGAAGCTCAGTTACCTGGCAGGACTGACAATGATATCAAGAACTATTGGAACACCAAGCTAAAGAAGAAGTTGATGGGGTTGCTTCCTGAATCTCACCAAAGAAAACCACCCTACCATCAATCCTCTCCTCAAAACCCACCACCATTTCCTTCTCATTCACTTTCCTCATCAATTTATGGAGATTATTGCAACTCTTATTATAGCCCAGCAGCAACCACATCTTTCACAGGCCTTGAACCTATTTCTGTTCCTTCAAGTACTTACACAAACACAAGCTGCACAACAACCTCAATTTCTCTCCCCTTTAACCAAAACCAAGAGTCCTTGGTTAGTGTTAGTCCCATGCAATATTACCCTATCACAACAGTGTTTGGAAGTGAAGGAAGTTGCAGTTCCTCTGATGGAAGCTGTAGTCAGGTTAGCCATGGCAGGGAAATCAAACAAGAAGAAATGGGGTTTCAGAATTTCATGTCCAACGGGTTTATGCCTAGTCACATAAGCATTAACAATAATGGAGATGAATATATTAACCAATGGGAAGAAAATCCAAATGGGTGTTTTTTCCAAAAGCAAACCCAATTGGGTTATGATATTGATGTTATTAAGCAACTAATTAGTAGCAATGGAAGCAGTAATGACCTAGGAAATTACATTCACTTATTATTAGAATAA 798 0.386 MLFPRSLLAFFLVKTWQGEFSDEEDRIICSLYANIGSRWSIIEAQLPGRTDNDIKNYWNTKLKKKLMGLLPESHQRKPPYHQSSPQNPPPFPSHSLSSSIYGDYCNSYYSPAATTSFTGLEPISVPSSTYTNTSCTTTSISLPFNQNQESLVSVSPMQYYPITTVFGSEGSCSSSDGSCSQVSHGREIKQEEMGFQNFMSNGFMPSHISINNNGDEYINQWEENPNGCFFQKQTQLGYDIDVIKQLISSNGSSNDLGNYIHLLLE 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi529g00003 265 FunFam Transcription factor MYB36 19 88 - -
Gabi529g00003 265 SMART sant 16 64 IPR001005 -
Gabi529g00003 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 18 66 IPR017930 -
Gabi529g00003 265 CDD SANT 19 60 IPR001005 -
Gabi529g00003 265 SUPERFAMILY Homeodomain-like 16 66 IPR009057 -
Gabi529g00003 265 Pfam Myb-like DNA-binding domain 18 60 IPR001005 -
Gabi529g00003 265 MobiDBLite consensus disorder prediction 74 93 - -
Gabi529g00003 265 Gene3D - 19 87 - -
Gabi529g00003 265 ProSiteProfiles Myb-like domain profile. 17 62 IPR001005 -
Gabi529g00003 265 PANTHER OS09G0431300 PROTEIN 17 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi529g00003 Gabi-Chr529 106989 108382 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi529g00003 18 68 MYB Transcription Factor Family AT5G57620 86.275 1.26e-23 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi529g00003 Myb_DNA-binding 4.8e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi529g00003 K09422 - gmx:100796382 298.901