Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi528g00010 ATGTCGGATGAGGTGGTGTTGTTGGATTTCAATCTCAGTATGTTTGGTATAAGAGTTAGGATTGCACTGGCGGAGAAAGGAATCAAGTATGAACACAAGGAAGAGGATCTGGTGAACACCAAGAGTGCTCTGCTTCTACAAATGAACCCCATTCATAAGAAAATCCCTGTCCTTATCCATAATGATCCATACCAAAGAGCTCAAGCCAGGTTTTGGGCTGATTTTGTTGATAAGAAGGTGCATGAAGTTGCAAAGAAGATATGGACTGGGAAGGTAGGTGAGCATGAAAAAGACAAGGAGGAGTTAATAGTGAATTTGAAGCAATTGGAGGAGGTTCTTGGGGATAAGCCTTATTTTGGGGGTGACACATTTGGGTTTCTTGATGTTGCTTTCATCCCTTTCCATAAATGGTTTTATAGTTATGAGACGGTAGGAGAATTGAAGGTGGATTGCCCAAAACTCAATGCATGGGCAAAGAGATGTTTGCAGAGAGAAAGTGTGTCCAAATACCTTTCTGATGAAAAGGAGGTCTATGAGTTTGTTCTTAGCTATAGAAAAAAAATTGGGGTGGACTAA 576 0.408 MSDEVVLLDFNLSMFGIRVRIALAEKGIKYEHKEEDLVNTKSALLLQMNPIHKKIPVLIHNDPYQRAQARFWADFVDKKVHEVAKKIWTGKVGEHEKDKEELIVNLKQLEEVLGDKPYFGGDTFGFLDVAFIPFHKWFYSYETVGELKVDCPKLNAWAKRCLQRESVSKYLSDEKEVYEFVLSYRKKIGVD 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi528g00010 191 CDD GST_C_Tau 63 184 IPR045074 GO:0004364|GO:0006749
Gabi528g00010 191 Gene3D - 63 191 - -
Gabi528g00010 191 Pfam Glutathione S-transferase, N-terminal domain 8 62 IPR004045 -
Gabi528g00010 191 SUPERFAMILY GST C-terminal domain-like 56 188 IPR036282 -
Gabi528g00010 191 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
Gabi528g00010 191 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 62 179 IPR045073 -
Gabi528g00010 191 SUPERFAMILY Thioredoxin-like 4 62 IPR036249 -
Gabi528g00010 191 Gene3D Glutaredoxin 2 62 - -
Gabi528g00010 191 Coils Coil 92 112 - -
Gabi528g00010 191 FunFam Glutathione S-transferase U20 62 191 - -
Gabi528g00010 191 Pfam Glutathione S-transferase, C-terminal domain 94 165 IPR004046 -
Gabi528g00010 191 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 62 190 IPR010987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi528g00010 Gabi-Chr528 164631 165598 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi528g00010 1 191 Glutathione S-transferase Gene Family AT1G17180 51.364 7.47e-75 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi528g00010 K00799 - gmx:100781460 304.293