Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi527g00014 ATGTCTCCTCCACCACCAAATTCCTCCACCTTAGCCATTCTCCCCTTCACATTCTTCTTCTCTGTTCTGGTCCTGTTTTCAACATCCACATACGCTCACACATGCTCTTCCAATCCAAACACATCCACATACACCTGCCCACCATTCCCTCCCAATCCACCTTTCCCATTCTCTTCTTCACCAGGCTGTGGCCACCCTTCTTTTCAGTTAAAGTGCTCAACTCCTCACTCTGTCATCTCCATTAACAACCTCTCTTTCTCCATCCTCAGTTACAACCCAAATTCTTCCTCTATTGTCCTCTCCCCTCACAACCCCATCAACACACAACCCCACAAGAATCATTGTCCATCTTCTCACTTTCTTTCCATTCCAAATCGATCTATAAACCTTTCTGGCTCACCTTTCAGGGTCTCAGATGCTCCATGTTCTCGCCTCTCATTCCTCCAGCCATGCTCGCCACCAACTCTACCAAACTGTAGCCACTGCCCTTGGGAATGCAACCTCATCAAGAACCCCGGTGAGGTTCTCCGAGACTGTAGATCTATGCACCACTCTGCCTCAGACTCTGAACCTACCTGCCAAAGCGATGTTCTGAGCCACCTCGACGAAATCCTATCATTGGGGATCGAGGTTGATTGGGACGAAACACAAGACCCTTACTTCTCAAGCTGTAACAGTTGCCATCTCAACAAGGGATTCTGTGGCTTCAATTCATCAGACCCAGATAAGCAATTCATCTGCTTTCACTCTGAATCCACCTTCTCTCCACCTTGGATTAACAAGTTGAAGAAGCACAACAGAATAGCTGTTTTCGCCGTCGTGATTGCATTGACTTCGTTGCTGCTTCTTGTTTCAGTTACAACTGCGATTCTCCGCTCAAGGAGGTTCAAGCCACCGTCCACGGAGGAAGACCCCACCACTATTTTCCTCCACAACCACCGCTCCGCGAGCCTTCTTCCGCCGGTGTTCACCTACGAAGAGCTGGAATCTTCCACCAACCACTTCGACCTCAAGCGCAAAATCGGCGACGGAGGGTTCGGCTCGGTCTTCCTCGGCCACCTCCACGACGGGAGGCTCGTGGCGGTGAAGTACCTCCACCGTCACCACGCAACAAGCGCGAAAAAGTTTTCCACCAAGTCATTCTGCAACGAGATCCTGATCCTATCCTCCATCGGTCACCCAAACCTCGTGAAGCTTCACGGCTATTGCAGCGACCCGAGAGGGTTGCTATTGGTCTACGATTACGTCCCAAACGGAACCTTAGCAGATCACCTCCATGGCAAGAAGGTTAAAGGGTCGCTGACGTGGCAAGAGAGGCTCGAAATTGCTCTGCAAACGGCGTTGGCAATGGAGTACCTTCACTTCTCGATGGTTCCGCCGATAGTTCACAGAGACATAACCTCATCGAATATATTCGTCGAGAGAGATATGAGTATCAAAGTCGGTGACTTTGGCCTCTCGAGGCTGTTAGTGTTGCAGGACAACGCTAACACTAACAGTAACACTTCGAATGGTGGTTACGTGTGGACGGGGCCACAAGGAACACCTGGGTATTTGGACCCGGATTATTACCGGTCGTTCCGGTTAACCGAGAAGAGTGACGTGTACAGCTTCGGGGTGGTGCTGTTGGAGCTTATATCGGGGCTCAGGGCGGTGGACCAGAGGAGGGACAAGCGTGAGATGGCGCTCGCGGATATGGTCGTTTCGAGGATCCAGATGGGGCAGCTGCAGCAAGTGCTGGACCCTTTTCTCGCCCTCGAAGGCGAAGCCGTGGACGCCGTCGCATCCGTGGCGGAGCTCGCTTTCCGCTGCGTCGCCGCGGATAAGGATGACCGCCCTGATTCGAAGGAGGTGGTGTTGGAGCTGAAACGGGTTCGGAGCCGGGTCTTGTTGTCGGCGAATGGTGACGTGGCGAAGGAGTAG 1923 0.5237 MSPPPPNSSTLAILPFTFFFSVLVLFSTSTYAHTCSSNPNTSTYTCPPFPPNPPFPFSSSPGCGHPSFQLKCSTPHSVISINNLSFSILSYNPNSSSIVLSPHNPINTQPHKNHCPSSHFLSIPNRSINLSGSPFRVSDAPCSRLSFLQPCSPPTLPNCSHCPWECNLIKNPGEVLRDCRSMHHSASDSEPTCQSDVLSHLDEILSLGIEVDWDETQDPYFSSCNSCHLNKGFCGFNSSDPDKQFICFHSESTFSPPWINKLKKHNRIAVFAVVIALTSLLLLVSVTTAILRSRRFKPPSTEEDPTTIFLHNHRSASLLPPVFTYEELESSTNHFDLKRKIGDGGFGSVFLGHLHDGRLVAVKYLHRHHATSAKKFSTKSFCNEILILSSIGHPNLVKLHGYCSDPRGLLLVYDYVPNGTLADHLHGKKVKGSLTWQERLEIALQTALAMEYLHFSMVPPIVHRDITSSNIFVERDMSIKVGDFGLSRLLVLQDNANTNSNTSNGGYVWTGPQGTPGYLDPDYYRSFRLTEKSDVYSFGVVLLELISGLRAVDQRRDKREMALADMVVSRIQMGQLQQVLDPFLALEGEAVDAVASVAELAFRCVAADKDDRPDSKEVVLELKRVRSRVLLSANGDVAKE 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi527g00014 640 SUPERFAMILY Protein kinase-like (PK-like) 315 622 IPR011009 -
Gabi527g00014 640 FunFam Putative serine/threonine-protein kinase At1g18390 family 311 415 - -
Gabi527g00014 640 ProSiteProfiles Protein kinase domain profile. 335 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi527g00014 640 CDD STKc_IRAK 341 624 - -
Gabi527g00014 640 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 629 IPR044652 GO:0004672
Gabi527g00014 640 Pfam Wall-associated receptor kinase C-terminal 193 250 IPR032872 -
Gabi527g00014 640 Pfam Protein kinase domain 336 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi527g00014 640 ProSitePatterns Tyrosine protein kinases specific active-site signature. 461 473 IPR008266 GO:0004672|GO:0006468
Gabi527g00014 640 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Gabi527g00014 640 Gene3D Transferase(Phosphotransferase) domain 1 416 635 - -
Gabi527g00014 640 Gene3D Phosphorylase Kinase; domain 1 311 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi527g00014 Gabi-Chr527 154108 156190 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi527g00014 1 639 Receptor kinase-like Gene Family AT1G69910 61.315 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Gabi527g00014 Pkinase 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi527g00014 - - qsa:O6P43_033079 862.062