Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi517g00006 | ATGGGAAAATTTGCAGCAAAGATTAGAGATACAACGAGGAATGGCACAAGGGTTTGGCTTGGAACCTTTGATAGTGCAGAGTCTGCTGCTTTAGCTTATGACCAAACTGCATTTTCCATGAGAGGCCATAAAGCTGCACTCAATTTTCCAGTCAAAAGGGTAAAAGAATCTTTGCAAGAAATCAAATATGGTTGCTTGCAAGGTTTTTCACCGGCACTTGCACTCAAGGAGTGGAACTGCATCCAAAGAAATTTGTCAACACAACCGGGGTATACAACAAGCCACCTGATCTGGAAGATGTTCAAGCTTGAAAATATCTTTGATTGA | 327 | 0.4128 | MGKFAAKIRDTTRNGTRVWLGTFDSAESAALAYDQTAFSMRGHKAALNFPVKRVKESLQEIKYGCLQGFSPALALKEWNCIQRNLSTQPGYTTSHLIWKMFKLENIFD | 108 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi517g00006 | 108 | PANTHER | DNA-BINDING DOMAIN | 2 | 59 | IPR044808 | GO:0003700|GO:0009873 | |
Gabi517g00006 | 108 | Pfam | AP2 domain | 2 | 43 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi517g00006 | 108 | CDD | AP2 | 2 | 51 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi517g00006 | 108 | SUPERFAMILY | DNA-binding domain | 2 | 51 | IPR016177 | GO:0003677 | |
Gabi517g00006 | 108 | SMART | rav1_2 | 2 | 56 | IPR001471 | GO:0003700|GO:0006355 | |
Gabi517g00006 | 108 | Gene3D | AP2/ERF domain | 1 | 52 | IPR036955 | GO:0003700|GO:0006355 | |
Gabi517g00006 | 108 | ProSiteProfiles | AP2/ERF domain profile. | 1 | 50 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi517g00006 | Gabi-Chr517 | 78657 | 78983 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi517g00006 | 2 | 106 | AP2-EREBP Transcription Factor Family | AT3G23240 | 57.143 | 1.54e-34 | 116 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Gabi517g00006 | AP2 | 8.7e-09 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi517g00006 | K14516 | - | gmx:100812017 | 142.124 |