Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi511g00007 ATGAGGATGGAAGAAAGCCATGGCTCAGAATGTTCCAAGACAGGACCCTCTAATGAAGATGGTTGTGAAAGTGAGCAAAACAACAACGGAGGAAGCTCAAGCAACAGCACAGTTGAAGAGAATGACAAGAAGACATCAGTGAGGCCATATGTTAGATCCAAATTGCCAAGGCTACGTTGGACACCTGATCTTCATCTTCGCTTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACCCCAAAGTTGGTTCTCCAGTTGATGAATATCAAAGGTTTAAGTATTGCTCATGTCAAGAGTCATTTACAGATGTTCAGGAGCAAGAAGTTAGTTGACACAAATCAAGTATTGGGTGATCATAGGCTTCTTGTAGAAAGTGGAGACAGAAATGTTTATAATCTCAGCCAACTTTCCATGATTCAAGGCTATAATCCAAGCCAAAGTTCAGCATACGGATGTGGATATAATGGGGATGCTTCTCATAGTATCTATGAAAACATGGTGCATAGGCCTTTCATGGGTAGGAGTTCATTGGATGAATCTGGAGGTGAATTTTATGGAAGAATGACTGAGAGGATCTCTGGGACCAAAAGTAACATCAATTGGTCTAATAGCAATTTCCAAGTGCATTCTTCCAATTTTGGTGAACAATCAACAAGTAAAGTCCATGAATCACCAGATCATAAATTCCTCTCATTTGGTGGGCATGATCGTGAATCTTTATGCACACAAATCAGATTGAGCCAGATTAATCAAATGCAGCCAAGTTCACAAGTTCTCATGCCTCATGATAATGCAGCCAGATTAAAAAAACCATTGGAATTGAAGACCTTGAAAAGGAAGGCTTCAGATATTGACCTTAATTTGGATCTATCACTTAAATTAAATTCAACGGTCAGTGCTGATAACCAAGGAAGCACAGTGGACCATGATGTTGATAGCAATCTATCACTTTCTTTGTTTTCTCAATCCTCCTCCTCTTATCCTAGCAGCAAGTTGAAAGAAGCACAAGATCATTGTAAGGAGCAAGGGAAAAGGGTCACTCTGGATCTGACTATATGA 1068 0.4007 MRMEESHGSECSKTGPSNEDGCESEQNNNGGSSSNSTVEENDKKTSVRPYVRSKLPRLRWTPDLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLSIAHVKSHLQMFRSKKLVDTNQVLGDHRLLVESGDRNVYNLSQLSMIQGYNPSQSSAYGCGYNGDASHSIYENMVHRPFMGRSSLDESGGEFYGRMTERISGTKSNINWSNSNFQVHSSNFGEQSTSKVHESPDHKFLSFGGHDRESLCTQIRLSQINQMQPSSQVLMPHDNAARLKKPLELKTLKRKASDIDLNLDLSLKLNSTVSADNQGSTVDHDVDSNLSLSLFSQSSSSYPSSKLKEAQDHCKEQGKRVTLDLTI 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi511g00007 355 FunFam Myb family transcription factor 54 112 - -
Gabi511g00007 355 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 52 112 IPR017930 -
Gabi511g00007 355 NCBIfam myb-like DNA-binding domain, SHAQKYF class 56 111 IPR006447 GO:0003677
Gabi511g00007 355 Pfam Myb-like DNA-binding domain 58 106 IPR001005 -
Gabi511g00007 355 MobiDBLite consensus disorder prediction 1 50 - -
Gabi511g00007 355 Gene3D - 55 112 - -
Gabi511g00007 355 MobiDBLite consensus disorder prediction 10 40 - -
Gabi511g00007 355 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 26 257 IPR044847 GO:0000976|GO:0006355|GO:0010158
Gabi511g00007 355 SUPERFAMILY Homeodomain-like 55 110 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi511g00007 Gabi-Chr511 149229 151450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi511g00007 47 112 G2-like Transcription Factor Family AT2G42660 81.818 1.12e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Gabi511g00007 Myb_DNA-binding 8.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi511g00007 - - gmx:102662997 449.129