Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5084g00001 ATGTTTGCTTGTTTTGTTGTTGTTCAAGATAAGATTAGCTTTTTAGAGAAGATGTTTTTGTTCATGAATCTGTGTGCCAAGCCAACCCCCGTTGATGGGGATGAAGATGACCGTGGGAACGGCACGCCGAACACAAAAGAAGCCGTCAAGGGTCTGGCGTCGCAGACTTTAAATCAACGTGTTTTCATCACTCCTGCAAGGTCTGATGATAATGAGAACTCGGGGGAATCTGAACAAGATATCCCAATGGCTTCAATGCTGAACACGGATTCGACTCCGGGGAATTTCCATGCACCCGCTGGGAATATGGGGTATTTCCATGGTGGGATATCAAGGGCTAACAACCCTACTGACAATGACATGGATGCTGAATGGGTTGAGCAGGATGATCCTGGAGTGTCAATCACTGTGAAGAGGTCAGCTAATGGGACCAGGCAAATTCGCCGTATCAAATTCAAGTAA 462 0.4632 MFACFVVVQDKISFLEKMFLFMNLCAKPTPVDGDEDDRGNGTPNTKEAVKGLASQTLNQRVFITPARSDDNENSGESEQDIPMASMLNTDSTPGNFHAPAGNMGYFHGGISRANNPTDNDMDAEWVEQDDPGVSITVKRSANGTRQIRRIKFK 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5084g00001 153 MobiDBLite consensus disorder prediction 47 70 - -
Gabi5084g00001 153 Pfam Transcription factor regulating root and shoot growth via Pin3 123 152 IPR013591 -
Gabi5084g00001 153 ProSiteProfiles BRX domain profile. 123 153 IPR013591 -
Gabi5084g00001 153 PANTHER PROTEIN BREVIS RADIX-LIKE 1 55 152 IPR044532 -
Gabi5084g00001 153 MobiDBLite consensus disorder prediction 30 100 - -
Gabi5084g00001 153 MobiDBLite consensus disorder prediction 77 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5084g00001 Gabi-Chr5084 5282 10087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5084g00001 55 152 Major Intrinsic Protein MIP AT1G31880 32.520 5.30e-14 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5084g00001 - - jre:109014251 79.3369