Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5081g00004 ATGACTCCTAAAAAGATTACATGGAAGTCTGTTACCTTGATCTTAAGTTGTTACAAGGTTAAGGAGGAATCAGAGAAACAGGTTTTAAAACAAGGTTCTTTTCAGAGGCTATGCCTATCGGATGTAAGCAATTCAAGCTCAACTCAGGCCATGGAAGATCTTTCAATTTCCCTTGCTGGCTCAAAACTTCATACATTCACCCTTGAGGAGCTAAGAGAAGCAACACATAATTTCTCATGGAGTAATATGCTTGGTGAAGGTGGGTTTGGACCTGTTTACAAGGGTTTTTTTGATGACACACTTAGGCCTGGTTTGAAGGCTCAGACTGTGGCTGTGAAACGATTGGACTTGGATGGCTTGCAAGGTCATAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTAAGGCATCCACATCTTGTTAAGTTAATTGGGTACTGTTATGAGGCTGAACACAGGCTTTTGGTTTATGAATACATGGCAAGAGGCAGCTTGGAGAATCAACTTTTCAAAAAATACTCTGCTGCCATGCCATGGTCAACCAGAATGAAAATTGCATTGGGAGCGGCTAAGGGCTTAGCCTTCCTTCACGAAGCAGATAAGCCTGTAATATACAGGGATTTCAAAGCTTCAAACATCTTACTAGATTCTGATTTCACAGCTAAACTCTCAGATTTCGGTCTAGCTAAGGATGCCCCTGAAGGGGAAGACACGCATGTAACAACACGCATAATGGGAACACAAGGCTATGCTGCTCCTGAGTACATCATGACAGGTCACCTCACAACCAAGAGTGATGTGTATAGCTATGGAGTGGTTCTGTTGGAATTGCTGACAGGAAAACGGGTAGTGGATAAGTCCTTCCAGTTAAATAGAGGGAAGAGCTTGGTGGAATGGGCAAGGCCTTTGTTGAGAGATCAAAGAAAGCTGCATAGTATCATAGACCGTAGATTGGAAGGGCAATTTCCTATGAAAGGAGCCATGAAGGTTGCTATGTTGGCTTTTAAATGCTTGAGTCACCACCCAAATCCAAGGCCGGCTATGAGTGATGTGATGAAGATTTTGGAACCACTTCAGGCAGTGAACGTCGGAGCGTCGAGCCTGTCGTTGGCTGGGTCCAGCTTCATTGTACTCTGCTACCTTCTCTTCAAGGAGCTCCGCAAGTTCTCCTTCAAGCTCGTTTTCTACCTCGCCCTCTCCGATATGCTTTGCAGTTTCTTCAGAATTGTAGGGGACCCATCCAAAGGTTTCTTTTGTTATGCTCAGGGCTATAGCACACATTTCTTTTGTGTGGCATCTTTCCTGTGGACTACAACAATTGCTTTTACCCTGCACCGTACTGTTGTAAAACACAAAACAGATGTTGAAGATTTGGAGGCCATGTTTCACTTGTATGTCTGGGGTACCTCCCTAGTTATGACAGTTATGCGCTCCTTTGGTAATGACCATAGACATCCTGGTGCATGGTGTTGGACTCAAACAGGTCGCACAGGGAAGGCGGTTCATTTTGTAACATTTTACATGCCACTCTGGGGAGCTATTTTATATAATGGGTTTACATACTTGCAAGTCATACGCATGCTGAATAATGCAACCCGTATGGCGGTTGGTATGTCAGGCCAAGCTCATGTCTCAGATGCAAGAGACAACATGAGGGCTCTGAATCGCTGGGGATACTATCCCCTAATTCTAATAGGATCATGGGCTTTTGGCACTATTAACCGTATTCATGATTTTTTTGAACCCAGCCATAAGATCTTCTGGCTCTCACTTCTTGATGTTGGAACGGCTGCTCTTATGGGCCTCTTCAACTCAATTGCATATGGCCTCAATTCTTCTGTTCGTCGGGCAGTTTGTGAAAGACTGGAAAAGTTCTGGCCTGAGAGATTAAACAGATGGCTACCTAACAATTTTAAGTACAAGAACCTACAGCAAGAAAGTGAACTAGTTCTGTTAAAAACTGAAGATCAGCGATAG 1980 0.4394 MTPKKITWKSVTLILSCYKVKEESEKQVLKQGSFQRLCLSDVSNSSSTQAMEDLSISLAGSKLHTFTLEELREATHNFSWSNMLGEGGFGPVYKGFFDDTLRPGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEAEHRLLVYEYMARGSLENQLFKKYSAAMPWSTRMKIALGAAKGLAFLHEADKPVIYRDFKASNILLDSDFTAKLSDFGLAKDAPEGEDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGKRVVDKSFQLNRGKSLVEWARPLLRDQRKLHSIIDRRLEGQFPMKGAMKVAMLAFKCLSHHPNPRPAMSDVMKILEPLQAVNVGASSLSLAGSSFIVLCYLLFKELRKFSFKLVFYLALSDMLCSFFRIVGDPSKGFFCYAQGYSTHFFCVASFLWTTTIAFTLHRTVVKHKTDVEDLEAMFHLYVWGTSLVMTVMRSFGNDHRHPGAWCWTQTGRTGKAVHFVTFYMPLWGAILYNGFTYLQVIRMLNNATRMAVGMSGQAHVSDARDNMRALNRWGYYPLILIGSWAFGTINRIHDFFEPSHKIFWLSLLDVGTAALMGLFNSIAYGLNSSVRRAVCERLEKFWPERLNRWLPNNFKYKNLQQESELVLLKTEDQR 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5081g00004 659 ProSiteProfiles G-protein coupled receptors family 2 profile 2. 359 613 IPR017981 GO:0004888|GO:0007166|GO:0016020
Gabi5081g00004 659 PANTHER OS01G0588500 PROTEIN-RELATED 46 360 - -
Gabi5081g00004 659 Gene3D - 356 612 - -
Gabi5081g00004 659 SUPERFAMILY Family A G protein-coupled receptor-like 361 630 - -
Gabi5081g00004 659 SUPERFAMILY Protein kinase-like (PK-like) 53 357 IPR011009 -
Gabi5081g00004 659 Pfam Slime mold cyclic AMP receptor 362 612 - -
Gabi5081g00004 659 Gene3D Transferase(Phosphotransferase) domain 1 163 355 - -
Gabi5081g00004 659 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
Gabi5081g00004 659 FunFam Serine/threonine-protein kinase BIK1 45 160 - -
Gabi5081g00004 659 PRINTS GCR1-cAMP receptor family signature 561 579 IPR022343 -
Gabi5081g00004 659 PRINTS GCR1-cAMP receptor family signature 389 404 IPR022343 -
Gabi5081g00004 659 PRINTS GCR1-cAMP receptor family signature 420 438 IPR022343 -
Gabi5081g00004 659 PRINTS GCR1-cAMP receptor family signature 370 388 IPR022343 -
Gabi5081g00004 659 PRINTS GCR1-cAMP receptor family signature 593 612 IPR022343 -
Gabi5081g00004 659 CDD STKc_IRAK 84 359 - -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 512 535 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 460 475 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 555 576 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 422 435 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 499 511 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 376 390 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 392 414 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 603 619 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 437 455 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 585 602 IPR022340 -
Gabi5081g00004 659 PRINTS Putative plant GPCR, GCR1, signature 359 374 IPR022340 -
Gabi5081g00004 659 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 161 367 - -
Gabi5081g00004 659 Gene3D Phosphorylase Kinase; domain 1 39 160 - -
Gabi5081g00004 659 Pfam Protein tyrosine and serine/threonine kinase 80 355 IPR001245 GO:0004672|GO:0006468
Gabi5081g00004 659 ProSiteProfiles Protein kinase domain profile. 78 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5081g00004 Gabi-Chr5081 84455 101510 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5081g00004 64 356 Glycoside Hydrolase AT3G07070 52.027 1.59e-96 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gabi5081g00004 PK_Tyr_Ser-Thr 6.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5081g00004 - K22987 gmx:100802636 649.818