Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5081g00003 ATGATGCACATGACCTTTTATTGGGGAAAAAAAGTGACCCTTCTAATCGATTCCTGGAAGACCGATTCATGGACGAGTTTTGCACTGAGTTTACTCGCGTGCCTCGTGGTTTCCGCTTTCTACCAGTATCTGGAGAATCGCCGGATTCGCCTGAAGCTCATCGCCGGCGAGAAGAGGCCCTCTGCGGTGGCGCCGGAGATCCAAACCCCTCTTCTGCGATGGAATGTCGCCGGAGATAAGGCCAGGTTAGGGATGAAATTCGCCGAAGCGATTCTGTTCGGGGTGAACTCGGCGATTGGGTATTTGTTGATGTTGGCCATCATGTCCTTCAACGGAGGGGTCTTTGTGGCCATCGTGGTGGGTCTCACACTTGGTTACTTCTTCTTCAGGACTGAAGGCGAAGATGCCGCGCTTTTCCTTGACAATTCTTGTGCATGTGCTTGA 444 0.5203 MMHMTFYWGKKVTLLIDSWKTDSWTSFALSLLACLVVSAFYQYLENRRIRLKLIAGEKRPSAVAPEIQTPLLRWNVAGDKARLGMKFAEAILFGVNSAIGYLLMLAIMSFNGGVFVAIVVGLTLGYFFFRTEGEDAALFLDNSCACA 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5081g00003 147 Pfam Ctr copper transporter family 4 129 IPR007274 GO:0005375|GO:0016020|GO:0035434
Gabi5081g00003 147 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5081g00003 Gabi-Chr5081 83442 84287 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5081g00003 1 147 Inorganic Solute Cotransporters AT5G20650 55.333 1.13e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5081g00003 K14686 - gmx:100795071 243.817