Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5079g00001 ATGGATCCCGAGAGAGGATCGTCCATGGATTCCACCGAATCAAGGTGGGTTTTCCAGGAGGACGAGGATCCGTCCGAGATTGAGGAGTACGACGCTGCTGATTTCCGACACCAGCCTATGTTCGATTCCGAGGATGAGGATAATGTTGAGCAGAAGCTTGTTCGGACTGGTCCACGAATCGATTCTTTCGATGTCGAAGCGCTTGAGGTTCCTGGTGCTCACAGAAATGACTATGAGGATGTTAGCGTGGGAAAGAGAATTCGGTTGGCTTTTCAAACTCTTGGTGTTGTTTTTGGTGATGTTGGAACAAGTCCATTATATACCTTCAGTGTTATGTTTAGAAAGGCCCCTATTGATGGAAATGAAGATATAATTGGAGCTTTATCACTTGTCTTGTACATTTTAATCTTGATTCCCTTAGTCAAGTATGTCCTTGTTGTTCTGTGGGCCAATGATGACGGTGAAGGTGGTACATTTGCATTGTACTCCTTGATTTGTCGTAATGCTAAGGTGAGTCTTCTTCCCAATCAGTTGCCATCAGATGCCCGAATATCCGGCTTTAGACTGAAGGTGCCTTCTCCTGAGCTTGAGAGGTCTTTAAAAATCAAAGAAAGCCTAGAGACTTCGGTGACTCTGAAGAAGATTCTACTGCTGTTAGTTCTTGCTGGTACTTCTATGGTGATAGCTAACGGGGTTGTTACACCAGCAATGTCAGTACTATCATCTGTTAATGGTTTGAAAGTTGGGGTAGATGCAATTAAGCAAGATGAAGTGGTGATGATTTCTGTTGCCTGCCTTGTCATTTTGTTCAGTGTACAGAAGTATGGAACAAGTAAAGTGGGGCTTGCCGTAGGACCTGCTTTGTTTATATGGTTTTGTTTTCTAGCGGGCATTGGTATATACAATCTTGTCAAATATGACAGCAGTGTCTTGAGGGCATTTAATCCTATTCACATCTATTATTTCTTTGCAAGGAATCCAACTAAAGCATGGTATTCTCTTGGGGGCTGTCTTCTGTGTGCAACTGGATCTGAAGCTATGTTTGCAGATCTTTGCTACTTCTCTGTGCGATCAGTTCAGCTTACATTTGTATTTCTTGTTTTGCCGTGCCTACTATTGGGTTATTTGGGTCAAGCTGCATACCTTATGGAAAACCATGCTGATGCTGGTCAAGCCTTTTTTTCTTCTGTTCCAAGTGGTGCATTCTGGCCAACTTTCCTTATTGCTAACATTGCTGCACTAATAGCAAGTCGGACTATGACAACAGCCACATTTTCTTGTATAAAACAGTCAACTTCACTTGGTTGTTTCCCCCGTCTTAAAATAATTCACACATCTCGGAAATTTATGGGCCAGATCTATATCCCTGTCATAAACTGGTTTCTCTTGGCTGTTTCTCTGGTGTTTGTCTGCACTATATCCAGCGTTGATGAGATTGGAAATGCATATGGCATTGCTGAGGTGGGGGTGATGATGATGACCACTATTTTAGTAACTCTTGTTATGCTCCTTATATGGCAGATACACATTATCATAGTGCTGATTTTCTTGGTGGTCTTCTTGGGATTGGAGTTGACTTTCTTTTCGTCGGTTTTGTGGAGTGTAACAGATGGAAGTTGGATTATATTGGTCTTTGCCACAATAATGTTTTTTATAATGTTTGTATGGAATTATGGAAGTAAGCTCAAGTATGAAACTGAAGTCAAGCAAAAGCTTTCAATGGATTTAATGCGAGAATTAGGCTGCAATCTTGGGACAATTCGTGCTCCTGGGATTGGTTTGCTGTATAATGAGTTGGTCAAAGGAATTCCGGGAATTTTTGGGCATTTTCTAACCACACTTCCAGCAATACACTCTATGGTCATATTTGTAAGTATCAAGTATGTTCCAGTTCCGATGGTGCCTCAAAATGAAAGGTTCCTTTTTCGGCGAGTCTGCCAGAAAAGCTATCATATATTTCGTTGTATTGCCAGGTATGGGTACAAAGATGTGCGCAAAGAAAATCACCAGACTTTTGAGCAGCTGCTGATGGAGAGCCTAGAGAAGTTTATACGTCGTGAGGCTCAGGAGAGGTCACTTGAGAGTGATGGGGATGATGATACTGATTCAGAGGATGAGTACTCAAGGGTTCTCATAGCTCCCAATGGGAGTGTTTACTCACTAGGTGTTCCTCTTCTGGCTGATTTTACGGATACAAGCAATCCCATTTTTGAAGCAAGCACATCAGAGGAGGTAATAAGGCCAGCGTCTCCTAAATCCCCAGTGCTTGATGCAGAGCAGAGTCTTGAAAGAGAGTTATCTTTTATTCGCAAGGCTAAAGAATCTGGAGTGGTTTATCTTCTTGGTCATGGGGATATTAGGGCAAGGAAAGACTCTTGGTTTATGAAGAAGCTAGTTATAAACTATTTTTATGCCTTTCTGAGAAAGAACTGCAGAAGGGGGATCACGAATTTAAGTGTACCCCATTCACATCTGATGCAAGTTGGCATGACTTACATGGTTTGA 2505 0.42 MDPERGSSMDSTESRWVFQEDEDPSEIEEYDAADFRHQPMFDSEDEDNVEQKLVRTGPRIDSFDVEALEVPGAHRNDYEDVSVGKRIRLAFQTLGVVFGDVGTSPLYTFSVMFRKAPIDGNEDIIGALSLVLYILILIPLVKYVLVVLWANDDGEGGTFALYSLICRNAKVSLLPNQLPSDARISGFRLKVPSPELERSLKIKESLETSVTLKKILLLLVLAGTSMVIANGVVTPAMSVLSSVNGLKVGVDAIKQDEVVMISVACLVILFSVQKYGTSKVGLAVGPALFIWFCFLAGIGIYNLVKYDSSVLRAFNPIHIYYFFARNPTKAWYSLGGCLLCATGSEAMFADLCYFSVRSVQLTFVFLVLPCLLLGYLGQAAYLMENHADAGQAFFSSVPSGAFWPTFLIANIAALIASRTMTTATFSCIKQSTSLGCFPRLKIIHTSRKFMGQIYIPVINWFLLAVSLVFVCTISSVDEIGNAYGIAEVGVMMMTTILVTLVMLLIWQIHIIIVLIFLVVFLGLELTFFSSVLWSVTDGSWIILVFATIMFFIMFVWNYGSKLKYETEVKQKLSMDLMRELGCNLGTIRAPGIGLLYNELVKGIPGIFGHFLTTLPAIHSMVIFVSIKYVPVPMVPQNERFLFRRVCQKSYHIFRCIARYGYKDVRKENHQTFEQLLMESLEKFIRREAQERSLESDGDDDTDSEDEYSRVLIAPNGSVYSLGVPLLADFTDTSNPIFEASTSEEVIRPASPKSPVLDAEQSLERELSFIRKAKESGVVYLLGHGDIRARKDSWFMKKLVINYFYAFLRKNCRRGITNLSVPHSHLMQVGMTYMV 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5079g00001 834 MobiDBLite consensus disorder prediction 1 21 - -
Gabi5079g00001 834 Pfam K+ potassium transporter 90 663 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi5079g00001 834 MobiDBLite consensus disorder prediction 1 47 - -
Gabi5079g00001 834 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 85 832 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi5079g00001 834 NCBIfam potassium uptake protein 89 834 IPR003855 GO:0015079|GO:0016020|GO:0071805
Gabi5079g00001 834 MobiDBLite consensus disorder prediction 30 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5079g00001 Gabi-Chr5079 981 9340 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5079g00001 7 834 Inorganic Solute Cotransporters AT5G09400 79.496 0.0 1311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5079g00001 - - gmx:100803841 1434.47