Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi506g00016 ATGTCGAAACCGTGGGGCAAAATCGGCGCGTGGGCCGCAGACGCCGAGCAGGCCGAAGCGGAGGAGCGTGAAGCTCAGCGCGAAGCCCGGAACTTCCCGAGCCTGAAGGAGGCTGTGACTGTGAGTGCAAAGCCCAAGGTGAAGAAGAAGATGTCGCTCATGGAGTTCACCGCCGCGACGGAATATTCGAGCTCGACGCCGGACGAGATGCGCCGTCTTCCGACGGGGCCGAAGGAGCGTTCCTCCGACGAAATGCAGTTCAACCGTCTCGGCGGTGGCTTCTCCTCCTACGGCGGCGGCGCCCGGTCCGGTCCTCCGCCGCGTGACAATGATGGTTCGTGGGGCGGAGGAGGAAGAAGATCCTATGGTGGATTTGATGAAGAACGCAGAGGTGGACCTCCTCCTTCTAGGGTTTCTGATTTTGATCAACCTTCGAGAGCTGACGAGGTTGATAATTGGGCTTCGGTGAAGAAATCTCTTCCGGTTTTCGATTCGGGTCGGCAAAATCGTTACGGGTCAGGGTCGCTCGGTGGTGGGTCAGGGTCTAGGGCTGATGGGGTGGATAATTGGGGGCTTGGTAAGAAGCCTATTCCTGCAAGATCTTCTACATTTGGTTCCGGGTTTCGTGATTCGGGTTCGGAGCCTGATCGCTGGACCCGGTTTGAGCGTGACAGTGATAGGGAGCGACCCAGATTGGAATTGGATCCTCCGAGAGGAGAGGTTTCGGTGGTGGTGAAGCCAAATCCATTTGGCGCGGCGAGGCCAAGGGAGGAAGTTTTGGCTGATAAGGGATTGGATTGGAAGAAGGTTGAGTCGGAAATTGAAACTAAGAAAACGAGTAGGCCTTCGAGTTCACACTCTAGTAGGCCCTCCAGTGCTCAATCTAGTCATTCTGAGGGTGCACCTGAAACTGTGGTGAAAGCAAGACCAAAGGTGAATCCCTTTGGGGATGCAAAACCTAGGGAAGTTTTGCTTGAGGAGCGAGGTAAGGATTGGAGGAAGATTGATCTTGAATTGGAGCATCGCCGTGTTGATAGGCCAGAAACAGTGGAGGAAAAATTGTTGAAGGAAGAAATTGATAATTTGAAGAAAGAAATTGAGAAAGACTCCACAACAAATTCAAATAAGGAATCTATGGATGAGACCGGTGGAGACCAAACCAGTACACGTGCAATGTTACTTCAGAAAGAAAGGGAACTGGAAATTCTTATCCGTGATTTGGATGACAAAGTTCGATTTGGGCAAAAAGCCATTGAAAGGCCAGGCTCTGCTGCAGGAAAGACTACTGGTTTTCCTGATAGGCCACCTTCTGAATCTGGCTCATTTGAGGATTCTAGAAGAGTGGAGTTTGCAGACAGACCTCGATCCCGTGGCGCAGGAGATACTTGGATGCGTCCTGGTGATGACAAAAGACCATCTCAAGGTAGCAGGGATAGACGAGGGTTTCTGAGTAGCAGAGACATGAATAGGTCAAGGTCAAGAGAGAGATGGTGA 1494 0.5194 MSKPWGKIGAWAADAEQAEAEEREAQREARNFPSLKEAVTVSAKPKVKKKMSLMEFTAATEYSSSTPDEMRRLPTGPKERSSDEMQFNRLGGGFSSYGGGARSGPPPRDNDGSWGGGGRRSYGGFDEERRGGPPPSRVSDFDQPSRADEVDNWASVKKSLPVFDSGRQNRYGSGSLGGGSGSRADGVDNWGLGKKPIPARSSTFGSGFRDSGSEPDRWTRFERDSDRERPRLELDPPRGEVSVVVKPNPFGAARPREEVLADKGLDWKKVESEIETKKTSRPSSSHSSRPSSAQSSHSEGAPETVVKARPKVNPFGDAKPREVLLEERGKDWRKIDLELEHRRVDRPETVEEKLLKEEIDNLKKEIEKDSTTNSNKESMDETGGDQTSTRAMLLQKERELEILIRDLDDKVRFGQKAIERPGSAAGKTTGFPDRPPSESGSFEDSRRVEFADRPRSRGAGDTWMRPGDDKRPSQGSRDRRGFLSSRDMNRSRSRERW 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi506g00016 497 MobiDBLite consensus disorder prediction 213 236 - -
Gabi506g00016 497 Pfam Plant specific eukaryotic initiation factor 4B 1 479 IPR010433 GO:0003743
Gabi506g00016 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 496 IPR010433 GO:0003743
Gabi506g00016 497 MobiDBLite consensus disorder prediction 439 497 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 415 497 - -
Gabi506g00016 497 Coils Coil 8 28 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 16 31 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 283 301 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 1 31 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 256 282 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 57 320 - -
Gabi506g00016 497 Coils Coil 352 372 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 362 393 - -
Gabi506g00016 497 MobiDBLite consensus disorder prediction 376 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi506g00016 Gabi-Chr506 149699 154136 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi506g00016 1 497 Eukaryotic Initiation Factors Gene Family AT3G26400 51.537 2.10e-140 413