Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi506g00015 ATGTCGAAACCGTGGGGCAAAATCGGCGCGTGGGCCGCAGACGCCGAGCAGGCCGAAGCGGAGGAGCGTGAAGCTCAGCGCGAAGCCCGGAACTTCCCGAGCCTGAAGGAGGCTGTGACTGTGAGTGCAAAGCCCAAGGTGAAGAAGAAGATGTCGCTCATGGAGTTCACCGCCGCGACGGAATATTCGAGCTCGACGCCGGACGAGATGCGCCGTCTTCCGACGGGGCCGAAGGAGCGTTCCTCCGACGAAATGCAGTTCAACCGTCTCGGCGGTGGCTTCTCCTCCTACGGCGGCGGCGCCCGGTCCGGTCCTCCGCCGCGTGACAATGATGGTTCGTGGGGCGGAGGAGGAAGAAGATCCTATGGTGGATTTGATGAAGAACGCAGAGGTGGACCTCCTCCTTCTAGGGTTTCTGATTTTGATCAACCTTCGAGAGCTGACGAGGTTGATAATTGGGCTTCGGTGAAGAAATCTCTTCCGGTTTTCGATTCGGGTCGGCAAAATCGTTACGGGTCAGGGTCGCTCGGTGGTGGGTCAGGGTCTAGGGCTGATGGGGTGGATAATTGGGGGCTTGGTAAGAAGCCTATTCCTGCAAGATCTTCTACATTTGGTTCCGGGTTTCGTGATTCGGGTTCGGAGCCTGATCGCTGGACCCGGTTTGAGCGTGACAGTGATAGGGAGCGACCCAGATTGGAATTGGATCCTCCGAGAGGAGAGGTTTCGGTGGTGGTGAAGCCAAATCCATTTGGCGCGGCGAGGCCAAGGGAGGAAGTTTTGGCTGATAAGGGATTGGATTGGAAGAAGGTTGAGTCGGAAATTGAAACTAAGAAAACGAGTAGGCCTTCGAGTTCACACTCTAGTAGGCCCTCCAGTGCTCAATCTAGTCATTCTGAGGGTGCACCTGAAACTGTGGTGAAAGCAAGACCAAAGGTGAATCCCTTTGGGGATGCAAAACCTAGGGAAGTTTTGCTTGAGGAGCGAGGTAAGGATTGGAGGAAGATTGATCTTGAATTGGAGCATCGCCGTGTTGATAGGCCAGAAACAGTGGAGGAAAAATTGTTGAAGGAAGAAATTGATAATTTGAAGAAAGAAATTGAGAAAGACTCCACAACAAATTCAAATAAGGAATCTATGGATGAGACCGGTGGAGACCAAACCAGTACACGTGCAATGTTACTTCAGAAAGAAAGGGAACTGGAAATTCTTATCCGTGATTTGGATGACAAAGTTCGATTTGGGCAAAAAGCCATTGAAAGGCCAGGCTCTGCTGCAGGAAAGACTACTGGTTTTCCTGATAGGCCACCTTCTGAATCTGGCTCATTTGAGGATTCTAGAAGAGTGGAGTTTGCAGACAGACCTCGATCCCGTGGCGCAGGAGATACTTGGATGCGTCCTGGTGATGACAAAAGACCATCTCAAGGTAGCAGGGATAGACGAGGGTTTCTGAGTAGCAGAGACATGAATAGGTCAAGAGAGAGATGGTGA 1488 0.5195 MSKPWGKIGAWAADAEQAEAEEREAQREARNFPSLKEAVTVSAKPKVKKKMSLMEFTAATEYSSSTPDEMRRLPTGPKERSSDEMQFNRLGGGFSSYGGGARSGPPPRDNDGSWGGGGRRSYGGFDEERRGGPPPSRVSDFDQPSRADEVDNWASVKKSLPVFDSGRQNRYGSGSLGGGSGSRADGVDNWGLGKKPIPARSSTFGSGFRDSGSEPDRWTRFERDSDRERPRLELDPPRGEVSVVVKPNPFGAARPREEVLADKGLDWKKVESEIETKKTSRPSSSHSSRPSSAQSSHSEGAPETVVKARPKVNPFGDAKPREVLLEERGKDWRKIDLELEHRRVDRPETVEEKLLKEEIDNLKKEIEKDSTTNSNKESMDETGGDQTSTRAMLLQKERELEILIRDLDDKVRFGQKAIERPGSAAGKTTGFPDRPPSESGSFEDSRRVEFADRPRSRGAGDTWMRPGDDKRPSQGSRDRRGFLSSRDMNRSRERW 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi506g00015 495 MobiDBLite consensus disorder prediction 213 236 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 415 495 - -
Gabi506g00015 495 Coils Coil 8 28 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 16 31 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 1 31 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 283 301 - -
Gabi506g00015 495 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 495 IPR010433 GO:0003743
Gabi506g00015 495 MobiDBLite consensus disorder prediction 256 282 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 439 495 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 57 320 - -
Gabi506g00015 495 Coils Coil 352 372 - -
Gabi506g00015 495 Pfam Plant specific eukaryotic initiation factor 4B 1 479 IPR010433 GO:0003743
Gabi506g00015 495 MobiDBLite consensus disorder prediction 362 393 - -
Gabi506g00015 495 MobiDBLite consensus disorder prediction 376 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi506g00015 Gabi-Chr506 149699 154136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi506g00015 1 495 Eukaryotic Initiation Factors Gene Family AT3G26400 51.361 1.64e-139 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi506g00015 - - gmx:100784238 613.994