Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5065g00004 ATGTCTCTTGAGTCAGCTACAGCTTCAGCTGAACACAATAACATCAGAGGAGTTCCCACTCATGGTGGACGCTATGTTCAATACAATATCTATGGCAACCTCTTCGAGGTCTCCAGGAAATATGTCCCTCCTATCCGACCTGTGGGAAGAGGAGCTTATGGTATTGTTTGTGCTGCTGTAAATGCGGAGACACTTGAAGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTTCGGCACATGGATCACGAAAATGTGATAGCCCTTAAAGACATTATACGACCACCACAGAAGGAGAACTTCAATGATGTGTACATTGTTTATGAGTTAATGGATACTGATTTGCATCAAATAATTCGTTCCAATCAACCATTGACTGATGATCATTGTCGGTTGTTACGAGGACTCAAATATGTACACTCAGCAAATGTTCTACACCGTGATCTAAAGCCTAGCAACTTGCTACTGAATGCCAATTGTGATCTTAAGATTGGAGACTTTGGTCTTGCTAGAACTACGTCTGAAACTGATTTTATGACTGAGTATGTGGTTACTCGATGGTACCGAGCTCCAGAATTGCTTCTTAATTGTTCAGAATATACTGCAGCGATTGATATATGGTCTGTTGGTTGCATCCTTGGTGAAATCATGACAAGACAACCCCTATTTCCTGGGAAAGATTATGTTCATCAGCTCAGATTGATCACAGAGCTCATAGGTTCACCGGATGACACTAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAGACAGCTTCCTCAATATCCAAAGCAACAGTTTGCTGCTAGATTTCCCAATATGTCTCCTGGTTCTGTTGATTTGTTAGAGAAGATGCTTATCTTTGATCCAAACAGACGCATTACAGTTGAGGAGGCTCTGTGCCACCAATACTTGGCACCACTCCATGATATTAACGAGGAACCTGTTTGTCCTAGACCTTTCAGTTTTGATTTTGAGCAACCGTCTTTCACTGAAGAGGATATCAAGGAACTCATCTGGAGAGAGTCTGTGAAGTTCAATCCCGATCCACCTATTTATTGA 1116 0.414 MSLESATASAEHNNIRGVPTHGGRYVQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETLEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVIALKDIIRPPQKENFNDVYIVYELMDTDLHQIIRSNQPLTDDHCRLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDTSLGFLRSDNARRYVRQLPQYPKQQFAARFPNMSPGSVDLLEKMLIFDPNRRITVEEALCHQYLAPLHDINEEPVCPRPFSFDFEQPSFTEEDIKELIWRESVKFNPDPPIY 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5065g00004 371 ProSitePatterns Protein kinases ATP-binding region signature. 48 72 IPR017441 GO:0005524
Gabi5065g00004 371 FunFam Mitogen-activated protein kinase 126 350 - -
Gabi5065g00004 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Gabi5065g00004 371 Gene3D Transferase(Phosphotransferase) domain 1 126 350 - -
Gabi5065g00004 371 Gene3D Phosphorylase Kinase; domain 1 25 360 - -
Gabi5065g00004 371 SMART serkin_6 42 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi5065g00004 371 ProSiteProfiles Protein kinase domain profile. 42 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi5065g00004 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 40 324 - -
Gabi5065g00004 371 CDD STKc_TEY_MAPK 35 366 - -
Gabi5065g00004 371 SUPERFAMILY Protein kinase-like (PK-like) 45 330 IPR011009 -
Gabi5065g00004 371 Pfam Protein kinase domain 46 323 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi5065g00004 371 FunFam Mitogen-activated protein kinase 27 136 - -
Gabi5065g00004 371 ProSitePatterns MAP kinase signature. 77 175 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5065g00004 Gabi-Chr5065 119666 126802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5065g00004 1 366 MAP Kinase Gene Family AT4G01370 86.290 0.0 676
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi5065g00004 Pkinase 2.9e-64 CL0016