Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5057g00005 ATGTCCTTCGATTCACATGCCCCTAATCCCTACCCCAAGGGTCTCCTCTGCAATGCCGGCGCTGGTGCTGCCGCTGGAGTTATTGCTGCTACGTTTGTGTGTCCTTTAGATGTTATCAAAACTCGGTTTCAGGTTCATGGAACGCCTCAGCTCGCTAATGGAAGTGTTAAAGGCAGTGTTATAGTTGGTAGTTTGGAACAAATATTTCACAAGGAGGGATTGCGTGGCATGTACCGTGGGCTAGCCCCAACTGTGCTGGCCTTACTTCCAAACTGGGCGGTCTATTTTACAATGTATGAGCAGCTCAAGAGCCTACTTTGTTCTGATGATGAAAGCCATCATCTCTCATTTGGAGCTAACATGTTAGCTGCTTCAGGTGCTGGAGCTGCCACTACCATTGCTACAAATCCACTCTGGGTTGTCAAGACTAGACTCCAAACCCAGGGAATGAGACCTGGTATTGTGCCATATAGGAGCACACTATCTGCTTTGAAGAGAATTGCTCATGAGGAGGGCATCCGAGGGCTATACAGTGGCCTTGTACCTGCTCTGGCTGGTATCAGTCATGTTGCCATACAGTTTCCAACATATGAGAAAATTAAATTTTATTTGGCGAAACAAGATAACACAGCAATTGATAAGCTCGGTGTTCGTGATGTTGCAATTGCCTCATCAGTCTCCAAAGTTTTCGCATCCACACTAACATATCCTCATGAGGTTGTTCGTTCTAGATTGCAAGAACAAGGGCACCACTCAGAGAAGCGGTACTCTGGTATGACTGACTGCATTAGAAAGGTATTTCAACAAGAGGGGCTTCCTGGTTTTTACCGCGGGTGTGCCACCAATCTCCTGAGGACAACCCCAGCTGCTGTAATCACATTCACCAGCTTTGAAATGATGCACCGTTTTCTTGTTTCATTTTTTCCTTCTGACCCACAGCCACACATTTTGTGA 954 0.4644 MSFDSHAPNPYPKGLLCNAGAGAAAGVIAATFVCPLDVIKTRFQVHGTPQLANGSVKGSVIVGSLEQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTMYEQLKSLLCSDDESHHLSFGANMLAASGAGAATTIATNPLWVVKTRLQTQGMRPGIVPYRSTLSALKRIAHEEGIRGLYSGLVPALAGISHVAIQFPTYEKIKFYLAKQDNTAIDKLGVRDVAIASSVSKVFASTLTYPHEVVRSRLQEQGHHSEKRYSGMTDCIRKVFQQEGLPGFYRGCATNLLRTTPAAVITFTSFEMMHRFLVSFFPSDPQPHIL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5057g00005 317 Pfam Mitochondrial carrier protein 114 207 IPR018108 -
Gabi5057g00005 317 Pfam Mitochondrial carrier protein 220 305 IPR018108 -
Gabi5057g00005 317 Pfam Mitochondrial carrier protein 15 107 IPR018108 -
Gabi5057g00005 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 105 IPR018108 -
Gabi5057g00005 317 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085
Gabi5057g00005 317 PRINTS Mitochondrial carrier protein signature 18 31 IPR002067 GO:0055085
Gabi5057g00005 317 PRINTS Mitochondrial carrier protein signature 80 100 IPR002067 GO:0055085
Gabi5057g00005 317 PRINTS Mitochondrial carrier protein signature 224 246 IPR002067 GO:0055085
Gabi5057g00005 317 PRINTS Mitochondrial carrier protein signature 130 148 IPR002067 GO:0055085
Gabi5057g00005 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 215 303 IPR018108 -
Gabi5057g00005 317 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 16 306 IPR044712 GO:0006862|GO:0055085
Gabi5057g00005 317 FunFam NAD+ transporter 112 308 - -
Gabi5057g00005 317 SUPERFAMILY Mitochondrial carrier 15 299 IPR023395 -
Gabi5057g00005 317 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 2 111 - -
Gabi5057g00005 317 Gene3D Mitochondrial carrier domain 2 111 IPR023395 -
Gabi5057g00005 317 ProSiteProfiles Solute carrier (Solcar) repeat profile. 115 203 IPR018108 -
Gabi5057g00005 317 Gene3D Mitochondrial carrier domain 112 307 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5057g00005 Gabi-Chr5057 85097 89837 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5057g00005 1 317 Chloroplast and Mitochondria Gene Families AT2G47490 77.918 1.01e-171 477