Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5049g00017 ATGCAAACTTTGGCTAGAGACCTAAATAACATGAGGGAGTATTATGAGAGTGGAAAGACAAAAAAAGCTTCTTGGAGAGAATCGCAACTCAAAGGGTTGCGTCGTTTCCTCATGGAAAAAGAGGAAGATATCTTGAAGGCCCTCATGCAAGATATAGGGAAACACCAAATTGAAGCTTTTAGAGACGAGGTAGGAACGTTGATGAAGTCCTTAAATACCGCATTGAGGTTTCTGAAAGATTGGATATCAGGGAAAAAGGCTAAATTGCCACAAATAGCATTGCTTAGTAGTGCAGAAATTGTTCCCGAGCCTCTGGGTCTTGTCCTCATTCTTTCTTCTTGGAATTTCCCCTTTGGACTTTCCTTGGAGCCTCTGATAGGAGCAGTAGCTGCCGGAAACGCAGTAATCTTAAAGCCTTCAGAGTTGTCTCCTTCATGTTCTTCTCTACTTGCCACTGGTCTCGCCACTTATTTGGACGATAAAGCCATTAAGGTTATCCAAGGAGGACCACATGAGTCTGAGCAACTACTACAACAACGATGGGACAAAATATTCTTCACAGGAAGTGCACGTGTGGGGAGGATTGTGATGTCTGCAGCTGCGAAGCATCTGACTCCTGTCACTATGGAGTTGGGTGGAAAATGCCCTGCAGTCGTTGATTCCCTTTCATCTTCTTGGGATATAGAGGCGGCTGTGAAGCGGATTATGGTGGGGAAATATGGGACTTGTGCCGGTCAAGCATGCATAGCAATCGATTATGTCCTTGTGGAAAAGGGATACTGTTCAACAGTGGTACAATTAATGAAGGTCTGGATCAAGAAAATGTTTGGAGAGAACCCAAAGCATTCCAACACTATTGCGAGGATAGTTAATAAACATCACTTCTTTAGATTGAAGAATCTTCTTGCTGATCAAGAGGTCAATAAATCTGCTGTTTATGGTGGCTCAATGGACGAAGAAAACTTATTTATTGAGCCGACAATCCTGGTGAATCCCCCACTTGAAGCAGCAATCATGGCAGAGGAAATATTTGGCCCATTGCTTCCAATTATTACTCTGGAGAAGATTGAGGACAGTATTAAATTCATAAGTTCTAGGCCTAAGCCTCTTGCCATTTATGCTTTCACCAAAAACAAAACACTGCAGAGAAGAATGGTATCTGAAACATCTTCTGGCAGCTTGACTTTCAACGATGCAATTATACAGTATGTAGCGGATTCTCTCCCATTTGGAGGAGTTGGTGAAAGTGGGTTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTCAGCCACCATAAGGCGATTGCCAGAAGAAGTTTCCTCACTGATTTTTGGTATAGGTATCCTCCATGGACACTCAATAAGTTTCAACTACTTGAGGTCTCTTACAACCTTGATTATCTTGGATTGCTCCTTGTCCTTTTGGGCTTAAAGAGACCTTCACAACGCAGATCTTATTTTGCTAGCTCGTGA 1476 0.4275 MQTLARDLNNMREYYESGKTKKASWRESQLKGLRRFLMEKEEDILKALMQDIGKHQIEAFRDEVGTLMKSLNTALRFLKDWISGKKAKLPQIALLSSAEIVPEPLGLVLILSSWNFPFGLSLEPLIGAVAAGNAVILKPSELSPSCSSLLATGLATYLDDKAIKVIQGGPHESEQLLQQRWDKIFFTGSARVGRIVMSAAAKHLTPVTMELGGKCPAVVDSLSSSWDIEAAVKRIMVGKYGTCAGQACIAIDYVLVEKGYCSTVVQLMKVWIKKMFGENPKHSNTIARIVNKHHFFRLKNLLADQEVNKSAVYGGSMDEENLFIEPTILVNPPLEAAIMAEEIFGPLLPIITLEKIEDSIKFISSRPKPLAIYAFTKNKTLQRRMVSETSSGSLTFNDAIIQYVADSLPFGGVGESGFGMYHGKFSFDTFSHHKAIARRSFLTDFWYRYPPWTLNKFQLLEVSYNLDYLGLLLVLLGLKRPSQRRSYFASS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5049g00017 491 FunFam Aldehyde dehydrogenase 12 216 - -
Gabi5049g00017 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Gabi5049g00017 491 Pfam Aldehyde dehydrogenase family 14 436 IPR015590 GO:0016491
Gabi5049g00017 491 PANTHER ALDEHYDE DEHYDROGENASE 2 471 IPR012394 GO:0006081
Gabi5049g00017 491 FunFam Aldehyde dehydrogenase 213 416 - -
Gabi5049g00017 491 SUPERFAMILY ALDH-like 10 453 IPR016161 GO:0016491
Gabi5049g00017 491 PIRSF ALDH 1 471 IPR012394 GO:0006081
Gabi5049g00017 491 Coils Coil 38 58 - -
Gabi5049g00017 491 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5049g00017 Gabi-Chr5049 120947 125496 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5049g00017 2 480 Aldehyde Dehydrogenase Gene Family AT4G36250 54.280 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5049g00017 K00128 - gmx:100784210 807.749