Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5049g00016 ATGGATACTTTGGGGAGAGACCTTAAGAACATGAGGGAGTATTATGAGAGTGGAAAGACAAAAGAAGCTTCTTGGAGAGAATCCCAGCTCAAAGGGTTGCGTCGTTTCCTCATAGAAAAAGAGGAAGGTATCTTGAACGCCCTCATGCAAGATTTAGGAAAACACCAAATTGAAGCTTTTAGAGACGAGATAGGGACACTGATGAAGTCCTTAAATTTCGCATTGAAGTTTCTGAAAGATTGGATGTCAGGCAAAAAGGCTAAATTGCCACAACTAGCATTGCTTACTAGCGCAGAAATTGTTCCCGAGCCTCTGGGTCTTGTCCTCATTATTTCTTCTTGGAATTTCCCCTTTGGACTTTCCTTGGAGCCTCTAATAGGAGCAGTAGCTGCCGGAAACGCAGCAATCTTAAAGCCTTCAGAGTTGTCTCCTGCATGTTCTTCTCTAATTGCCACTGGCCTCGCAAGTTATTTGGACACTAAAGCCATTAAGGTTATTCAAGGAGGACCACGTGAGTGTGAGCAACTACTACAGCAAAGATGGGATAAAATCTTCTTTACAGGAAATGCACGTGTGGGGCGGATTGTGATGTCTGCTGCTGCAAAACATCTTACTCCTATTACTCTGGAGTTGGGTGGAAAATGCCCTGCAGTTGTTGATTCCCTTTCATCTTCTTGGGATATTGAGGTTGCTGTGAAGCGGATTATGGTGGGGAAATATGGGACTTGTGCTGGTCAAGCATGCATAGCTGTCGACTATGTCCTTGTGGAAAATGGATACTGTTCCACAGTGGTAAAATTGATGAAAGCCTGGATCAAGAAAATGTTTGGAGAGAATCCAAAACATTCCAACACTATTGCGAAGATAGTTAATAAACAACACTTCTTAAGATTGAAGAATCTTCTTGCTGATCGAGATGTCAAAGAATCTGTAGTTTATGGTGGCTCAACGGACGAAGAAAACTTATTTATTGAGCCAACGATCTTGGTGAATCCCCCACTTGAAGCAGCAGTCATGGAAGACGAAATATTTGGTCCATTGCTCCCAATTATAACTCTGGAGAAGATTGAGGACAGTATTAAATTCATAAGCTCTAGGCCTAAGCCTCTTGCCCTTTATGTTTTCACCAAAAACAAAACTCTGCAGAGAAGAATGGTATCTGAAACATCATCTGGCAGCTTGACTTTCAACGATGCAATTCTACAATATGCAGCAGATTCTCTCCCATTTGGAGGAGTTGGTGAAAGTGGTTTTGGCATGTACCATGGGAAGTTCTCCTTTGACACATTCAGCCACCAGAAAGCGATTGTCAGAAGAAGTTTCCTCACTGATTTTTGGTATAGGTATCCTCCATGGACACTCAATAAGTTTCAACTACTTGAGGTCTCTTACAACCTTGATTATCTTGGGTTGCTCCTTGTCCTGCTAGGCTTAAAGAGACCTTCAAAACGCAGATCTTATTTTGCTAGCTAG 1473 0.4223 MDTLGRDLKNMREYYESGKTKEASWRESQLKGLRRFLIEKEEGILNALMQDLGKHQIEAFRDEIGTLMKSLNFALKFLKDWMSGKKAKLPQLALLTSAEIVPEPLGLVLIISSWNFPFGLSLEPLIGAVAAGNAAILKPSELSPACSSLIATGLASYLDTKAIKVIQGGPRECEQLLQQRWDKIFFTGNARVGRIVMSAAAKHLTPITLELGGKCPAVVDSLSSSWDIEVAVKRIMVGKYGTCAGQACIAVDYVLVENGYCSTVVKLMKAWIKKMFGENPKHSNTIAKIVNKQHFLRLKNLLADRDVKESVVYGGSTDEENLFIEPTILVNPPLEAAVMEDEIFGPLLPIITLEKIEDSIKFISSRPKPLALYVFTKNKTLQRRMVSETSSGSLTFNDAILQYAADSLPFGGVGESGFGMYHGKFSFDTFSHQKAIVRRSFLTDFWYRYPPWTLNKFQLLEVSYNLDYLGLLLVLLGLKRPSKRRSYFAS 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5049g00016 490 PIRSF ALDH 2 471 IPR012394 GO:0006081
Gabi5049g00016 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 12 434 IPR016162 GO:0016491
Gabi5049g00016 490 PANTHER ALDEHYDE DEHYDROGENASE 2 471 IPR012394 GO:0006081
Gabi5049g00016 490 Pfam Aldehyde dehydrogenase family 12 436 IPR015590 GO:0016491
Gabi5049g00016 490 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 213 416 IPR016163 GO:0016620
Gabi5049g00016 490 FunFam Aldehyde dehydrogenase 213 416 - -
Gabi5049g00016 490 FunFam Aldehyde dehydrogenase 12 216 - -
Gabi5049g00016 490 SUPERFAMILY ALDH-like 9 453 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5049g00016 Gabi-Chr5049 101116 104460 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5049g00016 2 480 Aldehyde Dehydrogenase Gene Family AT4G36250 52.818 0.0 554
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5049g00016 K00128 - gmx:100817701 820.846