Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5049g00007 ATGGCTTCCATAGCACTCACCACCACCACAACTCTCCCATCTTTCCGCTTCCGTTCCTCCTCCTCCTCCAAATCGCCACCACAACGCCATGCCACTTTCAAACCCCTCACACTAAACCGCAACCCTTCCATTTCTTTAATTCCATCCTTCCCACTCTCCAACGTCACTTTCAATCGGAAACACTCCACTACTACTGTTAGAGCCTCAGCCGCCATCACCCCAGCTCCGGCTCCGGCTCCGGCTCCGGTTCAGCCATGGCAAGGCGCGGCAATAAAACCGCTTTTAGCTTCTATAGCAACGGGGGTATTACTCTGGTTTGTTCCCGTTCCGTCTGGGGTTTCACGAAACGCGTGGCAATTGTTAGCGATTTTCTTGGGAACCATCGTCGGCATTATCACACAGCCATTGCCCCTTGGTGCCGTCGCCATATTGGGCTTGGGCGTTTCGGTTCTCACCAAAACCCTACCATTCGCTGCTGCATTCTCGGGCTTCGCTGATCCAATCCCTTGGCTCATTGCCCTTGCCTTCTTCTTCGCCAAAGGGTTCATCAAAACCGGGCTCGGAAATCGCGTCGCTTATCAATTCGTGTCCCTTTTCGGTAGCTCTTCGTTAGGATTAGGTTATAGCTTGGTTTTCAGCGAGGCCTTGTTGGCACCGGCTATTCCTTCGGTTTCCGCAAGAGCTGGTGGGATTTTTCTTCCGTTGGTTAAGTCTCTGTGTGTGGCTTGTGGTAGTAACGCCGGTGACGGAACGGAGAACAGACTTGGGTCGTGGTTGATGCTTACTTGCTTTCAGACTTCGGTTATTTCGTCGGCGATGTTTTTGACTGCAATGGCTGCGAATCCCCTTTGTGCCACTCTCACTCTGAACTCCATTAACCAGACCATTGGGTGGTTGGACTGGGCAAAAGCTGCCATTGTCCCTGGTTTGGTGTCGTTGGTGTTGGTGCCTTTGATCTTGTATATCATCTACCCTCCTACCTTGAAAAACAGTCCTGACGCACCCAAGCTTGCTAGGGAGAAGTTAGAGAAGATGGGGCCTATGTCAGCGAATGAGAAGATCATGACTGCGACTCTGTTTCTTACGGTGGGACTTTGGATTTTTGGAGGGGTTCTTAATATAGATGCTGTGACTGCTGCTATCCTTGGACTAACTGTACTCCTTGTCACTGGGGTCGTGACATGGAAGGAGTGCTTAGCTGAGGGAGTTGCCTGGGATACTCTCACGTGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACTGTAGTCAAGTTTGTTGGTGGGTTGGGTCTTTCATGGCAACTATCTTTTGGGATTCTGGTCCTTCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCTCATATTGGTGCCATGTTTACTGCATTCCTGTCTGTTGCTACTGCTCTGGGGACTCCTCCATTCTTTGCAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGCGGCCTTACTCATTATGGGATTGGGTCAGCTCCCGTGTTTTACGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGCTATGGATTCCTTATTAGTATTGTTAACATGATAATCTGGCTTGGAGTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1671 0.4997 MASIALTTTTTLPSFRFRSSSSSKSPPQRHATFKPLTLNRNPSISLIPSFPLSNVTFNRKHSTTTVRASAAITPAPAPAPAPVQPWQGAAIKPLLASIATGVLLWFVPVPSGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLPFAAAFSGFADPIPWLIALAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTLNSINQTIGWLDWAKAAIVPGLVSLVLVPLILYIIYPPTLKNSPDAPKLAREKLEKMGPMSANEKIMTATLFLTVGLWIFGGVLNIDAVTAAILGLTVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPFFAAMVLSFLSNLMGGLTHYGIGSAPVFYGANYVPLAKWWGYGFLISIVNMIIWLGVGGVWWKAIGLW 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5049g00007 556 Pfam Sodium:sulfate symporter transmembrane region 93 556 IPR001898 GO:0016020|GO:0022857|GO:0055085
Gabi5049g00007 556 CDD ArsB_NhaD_permease 128 550 - -
Gabi5049g00007 556 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 64 556 IPR030676 -
Gabi5049g00007 556 NCBIfam DASS family sodium-coupled anion symporter 108 550 IPR001898 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5049g00007 Gabi-Chr5049 29004 32694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5049g00007 1 555 Antiporters AT5G12860 79.893 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5049g00007 - - gmx:100793559 884.404