Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00025 ATGGCTTCAATTCAACGTCTGTCGAGTTCTGGATCCGAAGGGGGAGATCCGCAAATCGATGAGAGGAAAAGGAAGAGGATGCTGTCGAACCGTGAATCCGCGAGGCGATCGCGGATGAGGAAGCAGAAGCAGATGGAGGATCTGGCTGATGACGTCAGCAGATTGCAAGGTGAGAACAAGAAGCTGGTGGAGAGCATAAAGACCAACGAAGAAGCATTCATTGAGATCGAAGCCGCTAACAGCATCCTGAGGGCTCAGACTATGGAATTGGCCGATCGATTGCGCTTTCTTAACTCCATCCTTGAAATCGCTGAAGAAGTCAGCGGATTCTCTGTCGAAATCCCTGCGATACCAGATCCTCTCCTCAAACCGTGGCACATTTCTCGCCAGACACAGCCGATAGGCATGTTCCTGCATTGA 420 0.5095 MASIQRLSSSGSEGGDPQIDERKRKRMLSNRESARRSRMRKQKQMEDLADDVSRLQGENKKLVESIKTNEEAFIEIEAANSILRAQTMELADRLRFLNSILEIAEEVSGFSVEIPAIPDPLLKPWHISRQTQPIGMFLH 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00025 139 MobiDBLite consensus disorder prediction 1 15 - -
Gabi5029g00025 139 MobiDBLite consensus disorder prediction 1 52 - -
Gabi5029g00025 139 SMART brlzneu 18 82 IPR004827 GO:0003700|GO:0006355
Gabi5029g00025 139 FunFam BZIP transcription factor 20 71 - -
Gabi5029g00025 139 Coils Coil 31 65 - -
Gabi5029g00025 139 PANTHER BZIP TRANSCRIPTION FACTOR 44 8 104 - -
Gabi5029g00025 139 SUPERFAMILY Leucine zipper domain 22 71 IPR046347 GO:0003700|GO:0006355
Gabi5029g00025 139 Gene3D - 20 74 - -
Gabi5029g00025 139 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 20 67 IPR004827 GO:0003700|GO:0006355
Gabi5029g00025 139 CDD bZIP_plant_GBF1 23 73 IPR045314 GO:0003700|GO:0006355
Gabi5029g00025 139 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 25 40 IPR004827 GO:0003700|GO:0006355
Gabi5029g00025 139 MobiDBLite consensus disorder prediction 16 52 - -
Gabi5029g00025 139 Pfam bZIP transcription factor 22 71 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00025 Gabi-Chr5029 112799 114107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00025 1 134 bZIP Transcription Factor Family AT3G62420 50.000 2.34e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi5029g00025 bZIP_1 1.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5029g00025 K25786 - gmx:778144 194.897