Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00017 ATGAACTCCAATTCCAAAACCACCGGCTCTTCCTCCTCCGACCTTCAAAGACAACACGGAGAGGCAGAAATAGACGCTGATGGAACTTTGTTATTGAAGTTGAACAAATTGCTCATGCAAATCCAGGGAAAGCGAATGAAATCAATCAGAGAAAGAATTAAGAGTAACGGGAAGATTGTAAAACATCACGTTTCAATAGTCTTGTCAGCAATATCAAGAAAAGCCCCATTGCAGACAGAGGAAAATACCAATCAAATGCTTTCTTCAAGAATTGACCGTCCTCTATGTAAGTTCAGCGGTTTCTCTCAAGGTTCAGGAGACAAAGACCACGTTAACAGTCGGAACATATTATCTGAAACAAGTATCAAGATTCCATACATCGAAAGATTACCACCATATACATTTTGGATACATTTGGCCAGAAATCAGAGAATGGCCGAAGATCAATCAGTTGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCCCTGGTATGCAGTGACTCTGATGAAGAGTTATCAGTACCCAAGGAAGTTAAACACAACTTTTCTGAGGGTGAAGACCGACTTCTTTGGATGGCATTTGAGGAACATGGGTTAACTGAGGAGGTATTGAATATTGTCAGACAGTTTGTTGGGGGTACTAGTTCAGAAATTCAGGAGAGGTACAAAAATCTCAAGGAAAAGAATATGAGAAAGTGGGACCAGCATTCTGAAGATTCTGGACGATGTGATTCTCATATTGGCATATGTTTGGAGAAAAGCTTGAGTGCCACTTTAGACTCCTTTGATAACCTTTTCTGTCGCCGGTGCATTATTTTTGACTGTCCTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGCTAGTTTGGTCTGAACCTGAAGATGACAGGAAACCATGCAGTGATCAGTGTTACCTGCAGTTAAAGGATGTCAATATTTTGTCTGAAGATTCAACTCTGGGGTCTTATCAGGATAACAAAATTAAAACAATGGAACAGGAAGCTGGGATATTGGCACCCTTCAGTTCAAAGGAGCCTGGTAATCAGAGTACCAAAGCTATCTTGCAGGAAGAAAGATGCAATTATGTGACAGCAACACCTTTTACTACAGAAGTTGGTTGTCGCGGAGATCTCAATTCAAATGTGCCTGTATCAGAAAGTATGGGGAAACGGAAGGTCACAAATCTGTCAGAGTCAGCACTCTGTGACTCAACACGGCCTCCTGATGATTCTCAGGGTTCTTGTAAAAAGCTGAAAAGAATCTCCGATGATATTGTCAGGGACCTTAATTTGGATGCTTTGGGTGAAGAAAAACACCCAAGTACTTGTGCATCTTTGAAAAGTTTTGTTGAACATACTTCAAATAAATTAATAGTTTCTAGTAACACTTGCCATGGTGAGCATGACAAGGGTGTTGAGGATGGACAAAAGGATGTCACAAATGAGAGAGAATTTAAGCAGTTGTCCGATTCAATTGAAGGACAAGTTGATGAGATGGCATGTCTCTCAGAGTGGAAACCTCTGGAGAAAGATTTATATTCGAAGGGGGTAGAAATGTTTGGGAGAAACAGTTGCCTTATAGCCCGGAACTTACTTTTTGGCTTGAAGACTTGCATGCAAGTAGCTAACTACATGTATGCTGGTGGAGTGTCAATGCGCTGCAGATCCTTACCAAGTTCAATCATGGACAAAAATGGAAAAATTCATGCAGAGTTCACAGACCAAGGGATGCCATCAAGGTCACGGTTTCTGCGGAAAAGGAGCAAAACTAGGAAATTCAAATATTCTCGGAAGTCTGCTGGCCTCCCATCTATGTGGAGAAGAATTGCTCATGGGAAAAACCAATTTTACAAGCAGTATACACCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTCCTTGTGTTCATAATGAAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGTCCTGCAAAAACCGGTTCAGAGGATGTCATTGTGCTAAGAGTCAATGCAGGAGTCGACAATGTCCATGCTTTGCAGCTGGACGTGAATGTGATCCGGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCGAAGTCTGATGTTGCAGGATGGGGTGCCTTCTTAAAGAATCCAGTTAACAAAAATGATTACCTAGGAGAGTACACGGGTGAAATGATATCTCACAGAGAAGCAGAAAAGCGTGGGAAAATATATGATCGCGCCAACTTTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCGTATCGCAAAGGAGACAAATTGAAATTTGCGAACCATTCATCAAAACCCAACTGCTACGCAAAGGTCTTGTTGGTAGCTGGGGATCATCGAGTAGGCATATTTGCCAATGAGCACATTGAAGCAGGTGAGGAGCTTTTCTATGACTATCGCTATGGTCCAAATCATACACCACCATGGGTTCTTAAACTCAAGTCTGAGGGTCCCAAGAGAGACGAGTCAGCAGTTTCTCAGGGCAGAGCGAAGAAGCACCAGTCTCATTGA 2637 0.4198 MNSNSKTTGSSSSDLQRQHGEAEIDADGTLLLKLNKLLMQIQGKRMKSIRERIKSNGKIVKHHVSIVLSAISRKAPLQTEENTNQMLSSRIDRPLCKFSGFSQGSGDKDHVNSRNILSETSIKIPYIERLPPYTFWIHLARNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSDEELSVPKEVKHNFSEGEDRLLWMAFEEHGLTEEVLNIVRQFVGGTSSEIQERYKNLKEKNMRKWDQHSEDSGRCDSHIGICLEKSLSATLDSFDNLFCRRCIIFDCPLHGCSQPLIYPSEKQLVWSEPEDDRKPCSDQCYLQLKDVNILSEDSTLGSYQDNKIKTMEQEAGILAPFSSKEPGNQSTKAILQEERCNYVTATPFTTEVGCRGDLNSNVPVSESMGKRKVTNLSESALCDSTRPPDDSQGSCKKLKRISDDIVRDLNLDALGEEKHPSTCASLKSFVEHTSNKLIVSSNTCHGEHDKGVEDGQKDVTNEREFKQLSDSIEGQVDEMACLSEWKPLEKDLYSKGVEMFGRNSCLIARNLLFGLKTCMQVANYMYAGGVSMRCRSLPSSIMDKNGKIHAEFTDQGMPSRSRFLRKRSKTRKFKYSRKSAGLPSMWRRIAHGKNQFYKQYTPCGCQGMCGKQCPCVHNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGEMISHREAEKRGKIYDRANFSFLFDLNDQYVLDAYRKGDKLKFANHSSKPNCYAKVLLVAGDHRVGIFANEHIEAGEELFYDYRYGPNHTPPWVLKLKSEGPKRDESAVSQGRAKKHQSH 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00017 878 Gene3D SET domain 628 844 IPR046341 -
Gabi5029g00017 878 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 878 IPR025778 GO:0031519
Gabi5029g00017 878 ProSiteProfiles CXC domain profile. 614 713 IPR026489 -
Gabi5029g00017 878 SMART sant 509 559 IPR001005 -
Gabi5029g00017 878 SMART sant 182 232 IPR001005 -
Gabi5029g00017 878 SMART CXC_2 662 699 IPR033467 -
Gabi5029g00017 878 MobiDBLite consensus disorder prediction 856 871 - -
Gabi5029g00017 878 SMART set_7 727 848 IPR001214 GO:0005515
Gabi5029g00017 878 CDD SET_EZH 727 843 - -
Gabi5029g00017 878 ProSiteProfiles SET domain profile. 727 842 IPR001214 GO:0005515
Gabi5029g00017 878 Pfam SET domain 738 841 IPR001214 GO:0005515
Gabi5029g00017 878 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 29 877 IPR045318 GO:0006338|GO:0042054
Gabi5029g00017 878 FunFam Putative histone-lysine N-methyltransferase EZH2 628 844 - -
Gabi5029g00017 878 SUPERFAMILY SET domain 599 845 IPR046341 -
Gabi5029g00017 878 MobiDBLite consensus disorder prediction 856 878 - -
Gabi5029g00017 878 Pfam CXC domain 666 697 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00017 Gabi-Chr5029 63329 75558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00017 716 845 C2H2 Transcription Factor Family AT2G23740 27.211 1.26e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi5029g00017 SET 2.8e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5029g00017 - - gmx:100808730 1223.38