Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00016 ATGAACTCCAATTCCAAAACCACCGGCTCTTCCTCCTCCGACCTTCAAAGACAACACGGAGAGGCAGAAATAGACGCTGATGGAACTTTGTTATTGAAGTTGAACAAATTGCTCATGCAAATCCAGGGAAAGCGAATGAAATCAATCAGAGAAAGAATTAAGAGTAACGGGAAGATTGTAAAACATCACGTTTCAATAGTCTTGTCAGCAATATCAAGAAAAGCCCCATTGCAGACAGAGGAAAATACCAATCAAATGCTTTCTTCAAGAATTGACCGTCCTCTATGTAAGTTCAGCGGTTTCTCTCAAGGTTCAGGAGACAAAGACCACGTTAACAGTCGGAACATATTATCTGAAACAAGTATCAAGATTCCATACATCGAAAGATTACCACCATATACATTTTGGATACATTTGGCCAGAAATCAGAGAATGGCCGAAGATCAATCAGTTGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCCCTGGTATGCAGTGACTCTGATGAAGAGTTATCAGTACCCAAGGAAGTTAAACACAACTTTTCTGAGGGTGAAGACCGACTTCTTTGGATGGCATTTGAGGAACATGGGTTAACTGAGGAGGTATTGAATATTGTCAGACAGTTTGTTGGGGGTACTAGTTCAGAAATTCAGGAGAGGTACAAAAATCTCAAGGAAAAGAATATGAGAAAGTGGGACCAGCATTCTGAAGATTCTGGACGATGTGATTCTCATATTGGCATATGTTTGGAGAAAAGCTTGAGTGCCACTTTAGACTCCTTTGATAACCTTTTCTGTCGCCGGTGCATTAAGATTTTTGACTGTCCTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGCTAGTTTGGTCTGAACCTGAAGATGACAGGAAACCATGCAGTGATCAGTGTTACCTGCAGTTAAAGGATGTCAATATTTTGTCTGAAGATTCAACTCTGGGGTCTTATCAGGATAACAAAATTAAAACAATGGAACAGGAAGCTGGGATATTGGCACCCTTCAGTTCAAAGGAGCCTGGTAATCAGAGTACCAAAGCTATCTTGCAGGAAGAAAGATGCAATTATGTGACAGCAACACCTTTTACTACAGAAGTTGGTTGTCGCGGAGATCTCAATTCAAATGTGCCTGTATCAGAAAGTATGGGGAAACGGAAGGTCACAAATCTGTCAGAGTCAGCACTCTGTGACTCAACACGGCCTCCTGATGATTCTCAGGGTTCTTGTAAAAAGCTGAAAAGAATCTCCGATGATATTGTCAGGGACCTTAATTTGGATGCTTTGGGTGAAGAAAAACACCCAAGTACTTGTGCATCTTTGAAAAGTTTTGTTGAACATACTTCAAATAAATTAATAGTTTCTAGTAACACTTGCCATGGTGAGCATGACAAGGGTGTTGAGGATGGACAAAAGGATGTCACAAATGAGAGAGAATTTAAGCAGTTGTCCGATTCAATTGAAGGACAAGTTGATGAGATGGCATGTCTCTCAGAGTGGAAACCTCTGGAGAAAGATTTATATTCGAAGGGGGTAGAAATGTTTGGGAGAAACAGTTGCCTTATAGCCCGGAACTTACTTTTTGGCTTGAAGACTTGCATGCAAGTAGCTAACTACATGTATGCTGGTGGAGTGTCAATGCGCTGCAGATCCTTACCAAGTTCAATCATGGACAAAAATGGAAAAATTCATGCAGAGTTCACAGACCAAGGGATGCCATCAAGGTCACGGTTTCTGCGGAAAAGGAGCAAAACTAGGAAATTCAAATATTCTCGGAAGTCTGCTGGCCTCCCATCTATGTGGAGAAGAATTGCTCATGGGAAAAACCAATTTTACAAGCAGTATACACCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTCCTTGTGTTCATAATGAAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGTCCTGCAAAAACCGGTTCAGAGGATGTCATTGTGCTAAGAGTCAATGCAGGAGTCGACAATGTCCATGCTTTGCAGCTGGACGTGAATGTGATCCGGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCGAAGTCTGATGTTGCAGGATGGGGTGCCTTCTTAAAGAATCCAGTTAACAAAAATGATTACCTAGGAGAGTACACGGGTGAAATGATATCTCACAGAGAAGCAGAAAAGCGTGGGAAAATATATGATCGCGCCAACTTTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCGTATCGCAAAGGAGACAAATTGAAATTTGCGAACCATTCATCAAAACCCAACTGCTACGCAAAGGTCTTGTTGGTAGCTGGGGATCATCGAGTAGGCATATTTGCCAATGAGCACATTGAAGCAGGTGAGGAGCTTTTCTATGACTATCGCTATGGTCCAAATCATACACCACCATGGGTTCTTAAACTCAAGTCTGAGGGTCCCAAGAGAGACGAGTCAGCAGTTTCTCAGGGCAGAGCGAAGAAGCACCAGTCTCATTGA 2640 0.4197 MNSNSKTTGSSSSDLQRQHGEAEIDADGTLLLKLNKLLMQIQGKRMKSIRERIKSNGKIVKHHVSIVLSAISRKAPLQTEENTNQMLSSRIDRPLCKFSGFSQGSGDKDHVNSRNILSETSIKIPYIERLPPYTFWIHLARNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSDEELSVPKEVKHNFSEGEDRLLWMAFEEHGLTEEVLNIVRQFVGGTSSEIQERYKNLKEKNMRKWDQHSEDSGRCDSHIGICLEKSLSATLDSFDNLFCRRCIKIFDCPLHGCSQPLIYPSEKQLVWSEPEDDRKPCSDQCYLQLKDVNILSEDSTLGSYQDNKIKTMEQEAGILAPFSSKEPGNQSTKAILQEERCNYVTATPFTTEVGCRGDLNSNVPVSESMGKRKVTNLSESALCDSTRPPDDSQGSCKKLKRISDDIVRDLNLDALGEEKHPSTCASLKSFVEHTSNKLIVSSNTCHGEHDKGVEDGQKDVTNEREFKQLSDSIEGQVDEMACLSEWKPLEKDLYSKGVEMFGRNSCLIARNLLFGLKTCMQVANYMYAGGVSMRCRSLPSSIMDKNGKIHAEFTDQGMPSRSRFLRKRSKTRKFKYSRKSAGLPSMWRRIAHGKNQFYKQYTPCGCQGMCGKQCPCVHNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGEMISHREAEKRGKIYDRANFSFLFDLNDQYVLDAYRKGDKLKFANHSSKPNCYAKVLLVAGDHRVGIFANEHIEAGEELFYDYRYGPNHTPPWVLKLKSEGPKRDESAVSQGRAKKHQSH 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00016 879 CDD SET_EZH 728 844 - -
Gabi5029g00016 879 SUPERFAMILY SET domain 600 846 IPR046341 -
Gabi5029g00016 879 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 879 IPR025778 GO:0031519
Gabi5029g00016 879 SMART CXC_2 663 700 IPR033467 -
Gabi5029g00016 879 SMART sant 182 232 IPR001005 -
Gabi5029g00016 879 SMART sant 510 560 IPR001005 -
Gabi5029g00016 879 ProSiteProfiles CXC domain profile. 615 714 IPR026489 -
Gabi5029g00016 879 MobiDBLite consensus disorder prediction 857 879 - -
Gabi5029g00016 879 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 29 878 IPR045318 GO:0006338|GO:0042054
Gabi5029g00016 879 FunFam Putative histone-lysine N-methyltransferase EZH2 629 845 - -
Gabi5029g00016 879 ProSiteProfiles SET domain profile. 728 843 IPR001214 GO:0005515
Gabi5029g00016 879 Pfam SET domain 739 842 IPR001214 GO:0005515
Gabi5029g00016 879 Gene3D SET domain 629 845 IPR046341 -
Gabi5029g00016 879 SMART set_7 728 849 IPR001214 GO:0005515
Gabi5029g00016 879 Pfam CXC domain 667 698 IPR041355 -
Gabi5029g00016 879 MobiDBLite consensus disorder prediction 857 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00016 Gabi-Chr5029 63329 75558 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00016 717 846 C2H2 Transcription Factor Family AT2G23740 27.211 1.27e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi5029g00016 SET 2.8e-11 No_clan