Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00014 ATGAACTCCAATTCCAAAACCACCGGCTCTTCCTCCTCCGACCTTCAAAGACAACACGGAGAGGCAGAAATAGACGCTGATGGAACTTTGTTATTGAAGTTGAACAAATTGCTCATGCAAATCCAGGGAAAGCGAATGAAATCAATCAGATTAATCTTAGTTATGATTCCACAGGAAAGAATTAAGAGTAACGGGAAGATTGTAAAACATCACGTTTCAATAGTCTTGTCAGCAATATCAAGAAAAGCCCCATTGCAGACAGAGGAAAATACCAATCAAATGCTTTCTTCAAGAATTGACCGTCCTCTATGTAAGTTCAGCGGTTTCTCTCAAGGTTCAGGAGACAAAGACCACGTTAACAGTCGGAACATATTATCTGAAACAAGTATCAAGATTCCATACATCGAAAGATTACCACCATATACATTTTGGATACATTTGGCCAGAAATCAGAGAATGGCCGAAGATCAATCAGTTGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCCCTGGTATGCAGTGACTCTGATGAAGAGTTATCAGTACCCAAGGAAGTTAAACACAACTTTTCTGAGGGTGAAGACCGACTTCTTTGGATGGCATTTGAGGAACATGGGTTAACTGAGGAGGTATTGAATATTGTCAGACAGTTTGTTGGGGGTACTAGTTCAGAAATTCAGGAGAGGTACAAAAATCTCAAGGAAAAGAATATGAGAAAGTGGGACCAGCATTCTGAAGATTCTGGACGATGTGATTCTCATATTGGCATATGTTTGGAGAAAAGCTTGAGTGCCACTTTAGACTCCTTTGATAACCTTTTCTGTCGCCGGTGCATTAAGATTTTTGACTGTCCTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGCTAGTTTGGTCTGAACCTGAAGATGACAGGAAACCATGCAGTGATCAGTGTTACCTGCAGGATAACAAAATTAAAACAATGGAACAGGAAGCTGGGATATTGGCACCCTTCAGTTCAAAGGAGCCTGGTAATCAGAGTACCAAAGCTATCTTGCAGGAAGAAAGATGCAATTATGTGACAGCAACACCTTTTACTACAGAAGTTGGTTGTCGCGGAGATCTCAATTCAAATGTGCCTGTATCAGAAAGTATGGGGAAACGGAAGGTCACAAATCTGTCAGAGTCAGCACTCTGTGACTCAACACGGCCTCCTGATGATTCTCAGGGTTCTTGTAAAAAGCTGAAAAGAATCTCCGATGATATTGTCAGGGACCTTAATTTGGATGCTTTGGGTGAAGAAAAACACCCAAGTACTTGTGCATCTTTGAAAAGTTTTGTTGAACATACTTCAAATAAATTAATAGTTTCTAGTAACACTTGCCATGGTGAGCATGACAAGGGTGTTGAGGATGGACAAAAGGATGTCACAAATGAGAGAGAATTTAAGCAGTTGTCCGATTCAATTGAAGGACAAGTTGATGAGATGGCATGTCTCTCAGAGTGGAAACCTCTGGAGAAAGATTTATATTCGAAGGGGGTAGAAATGTTTGGGAGAAACAGTTGCCTTATAGCCCGGAACTTACTTTTTGGCTTGAAGACTTGCATGCAAGTAGCTAACTACATGTATGCTGGTGGAGTGTCAATGCGCTGCAGATCCTTACCAAGTTCAATCATGGACAAAAATGGAAAAATTCATGCAGAGTTCACAGACCAAGGGATGCCATCAAGGTCACGGTTTCTGCGGAAAAGGAGCAAAACTAGGAAATTCAAATATTCTCGGAAGTCTGCTGGCCTCCCATCTATGTGGAGAAGAATTGCTCATGGGAAAAACCAATTTTACAAGCAGTATACACCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTCCTTGTGTTCATAATGAAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGTCCTGCAAAAACCGGTTCAGAGGATGTCATTGTGCTAAGAGTCAATGCAGGAGTCGACAATGTCCATGCTTTGCAGCTGGACGTGAATGTGATCCGGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCGAAGTCTGATGTTGCAGGATGGGGTGCCTTCTTAAAGAATCCAGTTAACAAAAATGATTACCTAGGAGAGTACACGGGTGAAATGATATCTCACAGAGAAGCAGAAAAGCGTGGGAAAATATATGATCGCGCCAACTTTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCGTATCGCAAAGGAGACAAATTGAAATTTGCGAACCATTCATCAAAACCCAACTGCTACGCAAAGGTCTTGTTGGTAGCTGGGGATCATCGAGTAGGCATATTTGCCAATGAGCACATTGAAGCAGGTGAGGAGCTTTTCTATGACTATCGCTATGGTCCAAATCATACACCACCATGGGTTCTTAAACTCAAGTCTGAGGGTCCCAAGAGAGACGAGTCAGCAGTTTCTCAGGGCAGAGCGAAGAAGCACCAGTCTCATTGA 2613 0.4198 MNSNSKTTGSSSSDLQRQHGEAEIDADGTLLLKLNKLLMQIQGKRMKSIRLILVMIPQERIKSNGKIVKHHVSIVLSAISRKAPLQTEENTNQMLSSRIDRPLCKFSGFSQGSGDKDHVNSRNILSETSIKIPYIERLPPYTFWIHLARNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSDEELSVPKEVKHNFSEGEDRLLWMAFEEHGLTEEVLNIVRQFVGGTSSEIQERYKNLKEKNMRKWDQHSEDSGRCDSHIGICLEKSLSATLDSFDNLFCRRCIKIFDCPLHGCSQPLIYPSEKQLVWSEPEDDRKPCSDQCYLQDNKIKTMEQEAGILAPFSSKEPGNQSTKAILQEERCNYVTATPFTTEVGCRGDLNSNVPVSESMGKRKVTNLSESALCDSTRPPDDSQGSCKKLKRISDDIVRDLNLDALGEEKHPSTCASLKSFVEHTSNKLIVSSNTCHGEHDKGVEDGQKDVTNEREFKQLSDSIEGQVDEMACLSEWKPLEKDLYSKGVEMFGRNSCLIARNLLFGLKTCMQVANYMYAGGVSMRCRSLPSSIMDKNGKIHAEFTDQGMPSRSRFLRKRSKTRKFKYSRKSAGLPSMWRRIAHGKNQFYKQYTPCGCQGMCGKQCPCVHNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGEMISHREAEKRGKIYDRANFSFLFDLNDQYVLDAYRKGDKLKFANHSSKPNCYAKVLLVAGDHRVGIFANEHIEAGEELFYDYRYGPNHTPPWVLKLKSEGPKRDESAVSQGRAKKHQSH 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00014 870 ProSiteProfiles SET domain profile. 719 834 IPR001214 GO:0005515
Gabi5029g00014 870 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 870 IPR025778 GO:0031519
Gabi5029g00014 870 SMART sant 501 551 IPR001005 -
Gabi5029g00014 870 SMART sant 190 240 IPR001005 -
Gabi5029g00014 870 MobiDBLite consensus disorder prediction 848 863 - -
Gabi5029g00014 870 SUPERFAMILY SET domain 591 837 IPR046341 -
Gabi5029g00014 870 CDD SET_EZH 719 835 - -
Gabi5029g00014 870 Gene3D SET domain 620 836 IPR046341 -
Gabi5029g00014 870 SMART set_7 719 840 IPR001214 GO:0005515
Gabi5029g00014 870 ProSiteProfiles CXC domain profile. 606 705 IPR026489 -
Gabi5029g00014 870 FunFam Putative histone-lysine N-methyltransferase EZH2 620 836 - -
Gabi5029g00014 870 SMART CXC_2 654 691 IPR033467 -
Gabi5029g00014 870 MobiDBLite consensus disorder prediction 848 870 - -
Gabi5029g00014 870 Pfam CXC domain 658 689 IPR041355 -
Gabi5029g00014 870 Pfam SET domain 730 833 IPR001214 GO:0005515
Gabi5029g00014 870 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 29 869 IPR045318 GO:0006338|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00014 Gabi-Chr5029 63329 75558 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00014 708 837 C2H2 Transcription Factor Family AT2G23740 27.211 1.21e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi5029g00014 SET 2.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5029g00014 - - gmx:100808730 1190.64