Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00013 ATGAACTCCAATTCCAAAACCACCGGCTCTTCCTCCTCCGACCTTCAAAGACAACACGGAGAGGCAGAAATAGACGCTGATGGAACTTTGTTATTGAAGTTGAACAAATTGCTCATGCAAATCCAGGGAAAGCGAATGAAATCAATCAGATTAATCTTAGTTATGATTCCACAGGAAAGAATTAAGAGTAACGGGAAGATTGTAAAACATCACGTTTCAATAGTCTTGTCAGCAATATCAAGAAAAGCCCCATTGCAGACAGAGGAAAATACCAATCAAATGCTTTCTTCAAGAATTGACCGTCCTCTATGTAAGTTCAGCGGTTTCTCTCAAGGTTCAGGAGACAAAGACCACGTTAACAGTCGGAACATATTATCTGAAACAAGTATCAAGATTCCATACATCGAAAGATTACCACCATATACATTTTGGATACATTTGGCCAGAAATCAGAGAATGGCCGAAGATCAATCAGTTGTTGGAAGAAGACGTATATACTATGATCAACATGGAAGTGAAGCCCTGGTATGCAGTGACTCTGATGAAGAGTTATCAGTACCCAAGGAAGTTAAACACAACTTTTCTGAGGGTGAAGACCGACTTCTTTGGATGGCATTTGAGGAACATGGGTTAACTGAGGAGGTATTGAATATTGTCAGACAGTTTGTTGGGGGTACTAGTTCAGAAATTCAGGAGAGGTACAAAAATCTCAAGGAAAAGAATATGAGAAAGTGGGACCAGCATTCTGAAGATTCTGGACGATGTGATTCTCATATTGGCATATGTTTGGAGAAAAGCTTGAGTGCCACTTTAGACTCCTTTGATAACCTTTTCTGTCGCCGGTGCATTAAGATTTTTGACTGTCCTCTGCATGGCTGTTCTCAACCTTTAATATATCCTAGTGAAAAGCAGCTAGTTTGGTCTGAACCTGAAGATGACAGGAAACCATGCAGTGATCAGTGTTACCTGCAGTTAAAGGATGTCAATATTTTGTCTGAAGATTCAACTCTGGGGTCTTATCAGGATAACAAAATTAAAACAATGGAACAGGAAGCTGGGATATTGGCACCCTTCAGTTCAAAGGAGCCTGGTAATCAGAGTACCAAAGCTATCTTGCAGGAAGAAAGATGCAATTATGTGACAGCAACACCTTTTACTACAGAAGTTGGTTGTCGCGGAGATCTCAATTCAAATGTGCCTGTATCAGAAAGTATGGGGAAACGGAAGGTCACAAATCTGTCAGAGTCAGCACTCTGTGACTCAACACGGCCTCCTGATGATTCTCAGGGTTCTTGTAAAAAGCTGAAAAGAATCTCCGATGATATTGTCAGGGACCTTAATTTGGATGCTTTGGGTGAAGAAAAACACCCAAGTACTTGTGCATCTTTGAAAAGTTTTGTTGAACATACTTCAAATAAATTAATAGTTTCTAGTAACACTTGCCATGGTGAGCATGACAAGGGTGTTGAGGATGGACAAAAGGATGTCACAAATGAGAGAGAATTTAAGCAGTTGTCCGATTCAATTGAAGGACAAGTTGATGAGATGGCATGTCTCTCAGAGTGGAAACCTCTGGAGAAAGATTTATATTCGAAGGGGGTAGAAATGTTTGGGAGAAACAGTTGCCTTATAGCCCGGAACTTACTTTTTGGCTTGAAGACTTGCATGCAAGTAGCTAACTACATGTATGCTGGTGGAGTGTCAATGCGCTGCAGATCCTTACCAAGTTCAATCATGGACAAAAATGGAAAAATTCATGCAGAGTTCACAGACCAAGGGATGCCATCAAGGTCACGGTTTCTGCGGAAAAGGAGCAAAACTAGGAAATTCAAATATTCTCGGAAGTCTGCTGGCCTCCCATCTATGTGGAGAAGAATTGCTCATGGGAAAAACCAATTTTACAAGCAGTATACACCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTCCTTGTGTTCATAATGAAACTTGCTGTGAAAAATATTGTGGGTGTTCAAAGTCCTGCAAAAACCGGTTCAGAGGATGTCATTGTGCTAAGAGTCAATGCAGGAGTCGACAATGTCCATGCTTTGCAGCTGGACGTGAATGTGATCCGGATGTCTGTCGAAATTGTTGGGTTAGTTGCGGCGATGGTTCATTAGGGGAGCCACCTCGACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTTTTGGCGAAGTCTGATGTTGCAGGATGGGGTGCCTTCTTAAAGAATCCAGTTAACAAAAATGATTACCTAGGAGAGTACACGGGTGAAATGATATCTCACAGAGAAGCAGAAAAGCGTGGGAAAATATATGATCGCGCCAACTTTTCTTTCCTTTTTGACTTGAATGATCAGTACGTTCTTGATGCGTATCGCAAAGGAGACAAATTGAAATTTGCGAACCATTCATCAAAACCCAACTGCTACGCAAAGGTCTTGTTGGTAGCTGGGGATCATCGAGTAGGCATATTTGCCAATGAGCACATTGAAGCAGGTGAGGAGCTTTTCTATGACTATCGCTATGGTCCAAATCATACACCACCATGGGTTCTTAAACTCAAGTCTGAGGGTCCCAAGAGAGACGAGTCAGCAGTTTCTCAGGGCAGAGCGAAGAAGCACCAGTCTCATTGA 2664 0.4185 MNSNSKTTGSSSSDLQRQHGEAEIDADGTLLLKLNKLLMQIQGKRMKSIRLILVMIPQERIKSNGKIVKHHVSIVLSAISRKAPLQTEENTNQMLSSRIDRPLCKFSGFSQGSGDKDHVNSRNILSETSIKIPYIERLPPYTFWIHLARNQRMAEDQSVVGRRRIYYDQHGSEALVCSDSDEELSVPKEVKHNFSEGEDRLLWMAFEEHGLTEEVLNIVRQFVGGTSSEIQERYKNLKEKNMRKWDQHSEDSGRCDSHIGICLEKSLSATLDSFDNLFCRRCIKIFDCPLHGCSQPLIYPSEKQLVWSEPEDDRKPCSDQCYLQLKDVNILSEDSTLGSYQDNKIKTMEQEAGILAPFSSKEPGNQSTKAILQEERCNYVTATPFTTEVGCRGDLNSNVPVSESMGKRKVTNLSESALCDSTRPPDDSQGSCKKLKRISDDIVRDLNLDALGEEKHPSTCASLKSFVEHTSNKLIVSSNTCHGEHDKGVEDGQKDVTNEREFKQLSDSIEGQVDEMACLSEWKPLEKDLYSKGVEMFGRNSCLIARNLLFGLKTCMQVANYMYAGGVSMRCRSLPSSIMDKNGKIHAEFTDQGMPSRSRFLRKRSKTRKFKYSRKSAGLPSMWRRIAHGKNQFYKQYTPCGCQGMCGKQCPCVHNETCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGEMISHREAEKRGKIYDRANFSFLFDLNDQYVLDAYRKGDKLKFANHSSKPNCYAKVLLVAGDHRVGIFANEHIEAGEELFYDYRYGPNHTPPWVLKLKSEGPKRDESAVSQGRAKKHQSH 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00013 887 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 29 886 IPR045318 GO:0006338|GO:0042054
Gabi5029g00013 887 CDD SET_EZH 736 852 - -
Gabi5029g00013 887 SUPERFAMILY SET domain 608 854 IPR046341 -
Gabi5029g00013 887 Pfam CXC domain 675 706 IPR041355 -
Gabi5029g00013 887 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 887 IPR025778 GO:0031519
Gabi5029g00013 887 ProSiteProfiles SET domain profile. 736 851 IPR001214 GO:0005515
Gabi5029g00013 887 SMART set_7 736 857 IPR001214 GO:0005515
Gabi5029g00013 887 Gene3D SET domain 637 853 IPR046341 -
Gabi5029g00013 887 SMART sant 518 568 IPR001005 -
Gabi5029g00013 887 SMART sant 190 240 IPR001005 -
Gabi5029g00013 887 MobiDBLite consensus disorder prediction 865 887 - -
Gabi5029g00013 887 FunFam Putative histone-lysine N-methyltransferase EZH2 637 853 - -
Gabi5029g00013 887 Pfam SET domain 747 850 IPR001214 GO:0005515
Gabi5029g00013 887 MobiDBLite consensus disorder prediction 865 880 - -
Gabi5029g00013 887 SMART CXC_2 671 708 IPR033467 -
Gabi5029g00013 887 ProSiteProfiles CXC domain profile. 623 722 IPR026489 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00013 Gabi-Chr5029 63329 75558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00013 725 854 C2H2 Transcription Factor Family AT2G23740 27.211 1.30e-09 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gabi5029g00013 SET 2.8e-11 No_clan