Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00011 ATGGAGATTGATCATTTTTCTTCCACGGCACTAAATTTCAATGGAGTCGAAGTGAGTTATGGCTCTATACAAGATGTTGTGTTCCAAGAGAAACACAGTTTATCTGGAATTGAATTGCTTGGAGAGATTAATCCTCTCCCTAATGAGAGTGGAAAAGGAGCCAATTTGTTCAAATACCAAAATCAGCAACAACAACAACATGAAGAACTCAGATTTGATAACTTGATGTCAGAAGAGGTCAACTTTGACTTTGGTCCGCAACCAACACAAGCATTTCACGAAACTAGAGGGCTAAAGAATCAGGAAGTGGCAAGTTCAGAACTTGTTGAATACAATAAACAAGAGCCACCATCTTTAGCATCGTTGGAGCTCCTAAGAAGTCACGGAAGCAGGTTCAATAGGCTAAGTGGGCAAAATATAAGTAACATTGAAACTTCATTGGATCACCAAAACAGGTCAACAGAAGAAATAATAAGAGTGGCTGGAACAAGGTATGTACAATTATCTGCCCATTGGAATGATAGTTTTTTCATCCCCATGCACCCTTATGGATTTGATCTTGGGGATTTGTCTGAGGAAGAAAATAGAGACGTTGAACTTGCTCAGTTTCTCCTTGCTGCAGCTGAGAGAGTAGGGTGTCAACAATTTGAACGTGCAAGCAGGTTACTTATCGTTTGTGAAAGGAATTCATCTGCCACAGCAAACCCTGCTCAAAGAGTTATCTTTCATTTCGCTCAAGCACTTCGAGCGAGAATAGACAAAGAAACAGGAAAGGTGACAATTAAGGGGTTGGTGAAAAATGAAGAAAGGGAATTACATCGGAATATGGATACCATCTTGTCCCTTACATGCCATAAAAAAATCCCTTTTAATCAGGTAATGCAATTCACTGGGATACAAGCCATAGTGGAACATGTTGCATCTGATACGAAGATCCATCTGATAGATCTTGATATAAATAGTGGGGTGCACTGCACGGCTTTGATGCAAGCACTGGTTGAGCGCCAGGATTGTGCAGTGGAGCTTTTGAAGATGACTGCCATTGGACTTTATACATGCAAAACCAAGATAGAAGAGACTGGTAAAAGGTTAGCGAGTTTTGCTGAATCCTTGAACTTGCCCTTTTTATTTAAGGCAGTTTTTGTCACAGACATAGCAGAACTCAAGGAAGATCATTTTGAAGTTGGAAGGCATGAAGCTGTAGCTGTTTACTCTCCCTATTTACTGAGGAACATGATATCTAGGCCTGATTGTATGGAAAACTTGATGGGGGTTATTAGAAATATCAAACCATCTATAATGATAGTACTTGAAGTTGAAGCAAACCATAATTCACCCTCCTTTGTGAATCGCTTCATTGAAGCATTGTTCTTCTACTCAGCTTTTTTTGATTGCCTTGAAACCTGCACAAAACAGGAGAATGAGTGCAGAATGGCAACCGAAAGAATACTTTCTGCAGGGATAAGAAACATTGTTGCTATGGAAGGCAGGGAAAGGACGGTTAGAAATGTGAAGATAGATGTTTGGAGAAGGTTCTTTGCAAGGTACCGAATGGTGGAAACTGGATTTAGCAAGTCATGTCTTTACCAAGCTGATTTGGTTGCCAAAGAGTTTGCTTTTGGGAAATTATGCACTATAGAGAGGAATGGGAAGTGTCTCATAGTTGGATGGAAAGGTACCCCAATGCATTCAATCTCAGCTTGGAGGTTTCCTTGA 1716 0.4027 MEIDHFSSTALNFNGVEVSYGSIQDVVFQEKHSLSGIELLGEINPLPNESGKGANLFKYQNQQQQQHEELRFDNLMSEEVNFDFGPQPTQAFHETRGLKNQEVASSELVEYNKQEPPSLASLELLRSHGSRFNRLSGQNISNIETSLDHQNRSTEEIIRVAGTRYVQLSAHWNDSFFIPMHPYGFDLGDLSEEENRDVELAQFLLAAAERVGCQQFERASRLLIVCERNSSATANPAQRVIFHFAQALRARIDKETGKVTIKGLVKNEERELHRNMDTILSLTCHKKIPFNQVMQFTGIQAIVEHVASDTKIHLIDLDINSGVHCTALMQALVERQDCAVELLKMTAIGLYTCKTKIEETGKRLASFAESLNLPFLFKAVFVTDIAELKEDHFEVGRHEAVAVYSPYLLRNMISRPDCMENLMGVIRNIKPSIMIVLEVEANHNSPSFVNRFIEALFFYSAFFDCLETCTKQENECRMATERILSAGIRNIVAMEGRERTVRNVKIDVWRRFFARYRMVETGFSKSCLYQADLVAKEFAFGKLCTIERNGKCLIVGWKGTPMHSISAWRFP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00011 571 ProSiteProfiles GRAS family profile. 191 569 IPR005202 -
Gabi5029g00011 571 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 142 559 IPR005202 -
Gabi5029g00011 571 Pfam GRAS domain family 201 569 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00011 Gabi-Chr5029 32171 33886 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00011 198 570 GRAS Transcription Factor Family AT1G66350 31.283 6.93e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi5029g00011 GRAS 6e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5029g00011 - - gmx:100791952 829.32