Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5029g00003 ATGGAGATTGATCATTTTTCTTCCACAGCACTAAATTTCAATGGAATCGAGTTGAGTTATGGTTCTATACAAGATGTGTTCCAAGATAAACACTACAGTTTCTCTGGAATTGAATTGTTGGGAGAGATTAATCCTCTCCCTAATGAGAGTAGTGGAAAAGGAGCCAATTTGTTCAAAGACCATAATCAGCAACAACAACATGAAGAACTCAGAGTTGATAACTTGATGTTAGAAGAGGTCAACTTTGACTTTGATCCGCAGCCAACACAACCATTTCAGGAAACTAGAGGGCTAAAGAATCAGAAAGTGGCAAGTTCAGAACTTGTTGAATACAATAAACAAGTGCCACCATCTTTAGCATCGTTGGAGCTCCTAAGAAGTTACGGAAGCAGGTTCAATAGGCTAAGTGGGCAAAATATAAATAATATTGAAACTCCATTGGATCACTCAACAGAAGAAATAATAAGAGCGGCTGGAACAAGGTATGTACAATTATCTGCCCATTGGAATGATAGTTTTTCCATCCCTATGCACCCTTATGGATTTGATCTTGGGGATTTGTCTGAGGAAGAAAATAGAGACGTTGAACTTGCTCAGCTTCTCCTTGCTGCAGCTGAGAGAGTAGGGTGTCAGCAATTTGAACGTGCAAGCAAGTTACTTCTCCTTTGTGAAAGGAATTCATCTGCCACAGCAAACCCTGCTCAAAGAGTTATCTTTCATTTCGCTCAAGCACTTCGAGCGAGAATAGACAAAGAAACAGGAAGGGTGACAATTAAGGGGTTAGTGAAAAATGAAGGAAGGGAATTATATCAGAATATGGATATCATCTCGTCCCTTACATACCATAAAAAAATCCCTTTTAATCAGGTAATGCAATTCACTGGGATACAAGCCATAGTGGAACATGTTGCATCTGATACGAAGATCCATCTGATAGATCTTGATATAAATAGTGGGGTGCACTGCACGGCTTTGATGCAAGCACTGGTTGAGCGCCAGGATTGTGCAGTGGAGCTTATGAAGATGACTGCCATTGGACTTTATACATGCAAAACCAAGATAGAAGAGACTGGTAAAAGGTTAGCGAGTTTTGCTGAATCCTTGAACTTGCCCTTTTTATTTAAGGCAGTTTTTGTCACAGACATAGCAGAACTCAAGGAAGATCATTTTGAAGTTGGAAGGCATGAAGCTGTAGCTGTTTACTCTCCCTATTTACTGAGGAACATGATATCTAGGCCTGATTGTATGGAAAACTTGATGGGGGTTATTAGAAATATCAAACCATCTATAATGATAGTCCTTGAAGTAGAAGCAAACCATAATTCACCCTCCTTTGTGCATCGCTTCGTTGAAGCATTGTTCTTCTACTCAGCTTTTTTTGATTGCCTTGAAACCTGCATAAAACAGGAGAATGGGTGCAGAATGGCAACCGAAAATATATTTTCTGCAGGGATAAGAAACATTGTTGCTATGGAAGGCAGGGAAAGGACGGTTAGAAGTGTGAAGATTGATGTTTGGAGAAGGTTCTTTGCAAGGTACCGAATGGTGGAAACTGGATTTAGCAAGTCATGTTTATACCAAGCTGATTTGGTTGCCAAAGAGTTTGCTTTTGGGAAATTATGCACTATAGAGGGGAATGGGAAGTGTCTCATAGTTGGATGGAAAGGTACCCCAATGCATTCAATCTCAGCTTGGAGGTTTCTTTGA 1707 0.4007 MEIDHFSSTALNFNGIELSYGSIQDVFQDKHYSFSGIELLGEINPLPNESSGKGANLFKDHNQQQQHEELRVDNLMLEEVNFDFDPQPTQPFQETRGLKNQKVASSELVEYNKQVPPSLASLELLRSYGSRFNRLSGQNINNIETPLDHSTEEIIRAAGTRYVQLSAHWNDSFSIPMHPYGFDLGDLSEEENRDVELAQLLLAAAERVGCQQFERASKLLLLCERNSSATANPAQRVIFHFAQALRARIDKETGRVTIKGLVKNEGRELYQNMDIISSLTYHKKIPFNQVMQFTGIQAIVEHVASDTKIHLIDLDINSGVHCTALMQALVERQDCAVELMKMTAIGLYTCKTKIEETGKRLASFAESLNLPFLFKAVFVTDIAELKEDHFEVGRHEAVAVYSPYLLRNMISRPDCMENLMGVIRNIKPSIMIVLEVEANHNSPSFVHRFVEALFFYSAFFDCLETCIKQENGCRMATENIFSAGIRNIVAMEGRERTVRSVKIDVWRRFFARYRMVETGFSKSCLYQADLVAKEFAFGKLCTIEGNGKCLIVGWKGTPMHSISAWRFL 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5029g00003 568 Pfam GRAS domain family 198 566 IPR005202 -
Gabi5029g00003 568 ProSiteProfiles GRAS family profile. 188 566 IPR005202 -
Gabi5029g00003 568 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 146 556 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5029g00003 Gabi-Chr5029 14241 15947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5029g00003 187 567 GRAS Transcription Factor Family AT3G03450 30.256 1.95e-49 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi5029g00003 GRAS 9.1e-80 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5029g00003 - - gmx:100791952 794.653