Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5024g00005 ATGAATGGGGAGGAGAGGGGCAAATACCTGGTCCTTACTCTTAATAATTGTGCTAAATTTATTGAGTCAGGAAGCATCGTGAATGCAGATACTGCACTGGACTATATTGCTCACGTTGCATCCCATGATGGTGATGCAATGCAGCGAGTAGCCACCTATGTGAGTGAGGGCCTAGCTTGCCAAGCACTGAAAAATTTTCGTGGTGTACCTAAAGCTCTGAGTTTGTCAAAAACATTGTCAACATCAGAAGAACTACTTGTTAAGAAATTATTCTTTGATATGTTTCCATTTTTAGAGATTGCGTATGTGATCACAAGTCATGCCATTGCTGAAGCCATGGAAGGGGAAGAAGTGATCAATATCATTGATCTCAGTGCATCTGATGCTGCTCAGTGGATTTATCTTATGAAGAGATTAAAAGAAAATCAAAATAACACACCATTTCTGAAAATTACAGGCATTCATGAGAAGAAGGAAGTGTTGGAGAAAATGGCCATTTATTTGAGAGTAGAAGCAGAAAAGTTGAATTTCCATCTTCAGTTCAATGCTATTGTAAGCACTTTGGAGAATCTTGACCTTGAAGGATTGCCTGTCATGAAAGGAGAGCCTCTAGCAATCAGTTCAGTACTTCAGTTACACTCTCTTCTGGCCACTGATGACCCAATTGTGTGCAGCAGGAGCTTGCCTGCAGAATCAATGAATCAACGAACCTTTGCAGAGATGCTTGGGAAACAAAAGATCAACCCGAGTTCGAATTCATCATTGTTACCACTTCCTCTATGTGCTTCTTCACCAAGATGGTGTGCTTTCTAA 813 0.4059 MNGEERGKYLVLTLNNCAKFIESGSIVNADTALDYIAHVASHDGDAMQRVATYVSEGLACQALKNFRGVPKALSLSKTLSTSEELLVKKLFFDMFPFLEIAYVITSHAIAEAMEGEEVINIIDLSASDAAQWIYLMKRLKENQNNTPFLKITGIHEKKEVLEKMAIYLRVEAEKLNFHLQFNAIVSTLENLDLEGLPVMKGEPLAISSVLQLHSLLATDDPIVCSRSLPAESMNQRTFAEMLGKQKINPSSNSSLLPLPLCASSPRWCAF 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5024g00005 270 Pfam GRAS domain family 12 221 IPR005202 -
Gabi5024g00005 270 ProSiteProfiles GRAS family profile. 1 270 IPR005202 -
Gabi5024g00005 270 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 13 235 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5024g00005 Gabi-Chr5024 113237 114049 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5024g00005 4 223 GRAS Transcription Factor Family AT1G50420 50.000 2.46e-70 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gabi5024g00005 GRAS 2.1e-49 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5024g00005 - - vra:106778126 255.373