Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi501g00004 ATGTCAACAACGTCCCAAACTATTGTTAACCACAGTTTGTTTGAAGATCAAGATCAGATCCCTACGCAGATGGGGTTCATTCCTTTCTCAGCAAATCTTACCTTCCCTTCTTTGGGTTGCCATCCATCTTTGAAATCCATCAGTGTAATAGCTCCTTCACTTTCTTCTGAAGCCGCTAATTCTACTGCAAATTTTGCAGAAACCCTACTTGCAACCTCTGTTCAAAAACCACAAGATCTCACTTCTATTTTTGGAGGAGGATCGAGGGTAAATTCAGGGGCATGGGGAGAAGTAACAGATTACTTGATTGGTAAAAGAAGTGGAGGAGATGATCAATATCTAGGGGTTTCTGCCATGAAGATGAAGAAGATCAAGGCAAGAAGGAAGGTGAGGGAACCAAGGTTTTGCTTCAAGACTATGAGCGATGTGGATGTGTTGGATGATGGCTACAAGTGGAGGAAGTACGGGCAGAAAGTGGTAAAGAACACACAACACCCAAGCTACTACCGTTGCACCCAAGATAATTGTCGAGTAAAGAAACGCGTGGAGCGCTTAGCTGAGGATCCAAGGATGGTGATAACCACATATGAAGGGAGACATGTGCACTCTCCATCAAATGAACTTGAAGACTCGCAAACTTCATCTGAACTTAGCAATTTCTTGTGGTAG 669 0.4335 MSTTSQTIVNHSLFEDQDQIPTQMGFIPFSANLTFPSLGCHPSLKSISVIAPSLSSEAANSTANFAETLLATSVQKPQDLTSIFGGGSRVNSGAWGEVTDYLIGKRSGGDDQYLGVSAMKMKKIKARRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNELEDSQTSSELSNFLW 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi501g00004 222 SUPERFAMILY WRKY DNA-binding domain 138 204 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi501g00004 222 Gene3D WRKY domain 133 198 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi501g00004 222 SMART WRKY_cls 146 204 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi501g00004 222 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 91 207 IPR044810 GO:0003700
Gabi501g00004 222 MobiDBLite consensus disorder prediction 207 222 - -
Gabi501g00004 222 ProSiteProfiles WRKY domain profile. 141 205 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi501g00004 222 MobiDBLite consensus disorder prediction 197 222 - -
Gabi501g00004 222 FunFam WRKY transcription factor 57 132 205 - -
Gabi501g00004 222 Pfam WRKY DNA -binding domain 147 202 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi501g00004 Gabi-Chr501 17628 21071 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi501g00004 116 222 WRKY Transcription Factor Family AT4G39410 78.761 1.40e-61 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi501g00004 WRKY 1.8e-21 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi501g00004 - - gmx:100127389 332.413