Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5016g00015 ATGCAGAACGCACAGAGAACTGAAGCAGAACGGTTGCTAGGGGTAGCAGAGAAGCTCTTACAGAACCGAGATCTGATCGGGTCAAGGGAATTCGCCATCCTCGCTCAGGAAACGGAGCCTCTTCTGGAAGGTTCCGACCAGATCCTCGCCATCGTCGACGTCCTCATCGCCGCCGAGAAGCGCGTCAACAACCACCCTGACTGGTACTCCATCCTCCAGGTGGATCGCCGCTCCGAAGACATCGACTTCATAAAGAAGCAGTACCGCCGCCTCGCCCTCCTCCTCCACCCTGACAAGAGCCGCTTCTACCTCGCCGATCACGCTTTCAAGCTAGTCGCCGACGCATGGAACGTTCTGTCCGACCCACTGAAAAAGTCTCACTACGACAAGGAGCTCTTCTCCTTCTTCACCCGGGTCGATTTGTCCGTTCCAAGTTGGGTCCAGCAAGATAAGTTGCCGGTTCGCAGGACTGGGCCTGGGCTCGGGTCTGGGCCCAACTTGGGATTCGATCCGCGGAACAGAGGTAGCGCCGGCGTGAGAGACGAGATTTCTTCGGATGAGAACTCGCGGAGGAGGACAGCGACTTTCTGGACGGCGTGTCCGTACTGTTACCGGTTGTACGAGTACCCAACGTTTTACGAGAGTTGTTGTTTGAAGTGCCAGAATTGCGACAGGTCCTTCCACGGCGTTGCGGTTCCGTCTTTGCCGCCGCTTGTGCAGGGACAGGAGGCTTATTATTGCTGCTGGGGTTTCTTTCCTATGGGGTTCGTCATCGGAAGCCTTGGCTCTGCAGAGAAAGAGGCTGCGCCGCCGCCACCACAGCCCGCACAGCAGCCACCAGCACCACAGCAAGCACCGCAACCACAGCCACAGCCTGCTTCTACACTTCCGAATTGGATGCCTGTTCCGGCGCCGGCGCCGGCGGATAATGGTAGGAATAATGCTGAACCGACGGTGGTGGTTCCTAGGGTAACTAGGAGGGCAGCTGCTGCGGCTAATCGGAATGGGGTTGCTTCGGGAGCTGTTACGCGGACTCGAGGTAGGCCACGGAAGTATCCTCGGCCCTAG 1068 0.5815 MQNAQRTEAERLLGVAEKLLQNRDLIGSREFAILAQETEPLLEGSDQILAIVDVLIAAEKRVNNHPDWYSILQVDRRSEDIDFIKKQYRRLALLLHPDKSRFYLADHAFKLVADAWNVLSDPLKKSHYDKELFSFFTRVDLSVPSWVQQDKLPVRRTGPGLGSGPNLGFDPRNRGSAGVRDEISSDENSRRRTATFWTACPYCYRLYEYPTFYESCCLKCQNCDRSFHGVAVPSLPPLVQGQEAYYCCWGFFPMGFVIGSLGSAEKEAAPPPPQPAQQPPAPQQAPQPQPQPASTLPNWMPVPAPAPADNGRNNAEPTVVVPRVTRRAAAAANRNGVASGAVTRTRGRPRKYPRP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5016g00015 355 Pfam DnaJ domain 67 129 IPR001623 -
Gabi5016g00015 355 SUPERFAMILY Chaperone J-domain 60 133 IPR036869 -
Gabi5016g00015 355 Gene3D DnaJ domain 55 139 IPR036869 -
Gabi5016g00015 355 PRINTS DnaJ domain signature 69 87 IPR001623 -
Gabi5016g00015 355 PRINTS DnaJ domain signature 104 124 IPR001623 -
Gabi5016g00015 355 PRINTS DnaJ domain signature 88 103 IPR001623 -
Gabi5016g00015 355 MobiDBLite consensus disorder prediction 268 304 - -
Gabi5016g00015 355 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Gabi5016g00015 355 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Gabi5016g00015 355 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 302 - -
Gabi5016g00015 355 MobiDBLite consensus disorder prediction 154 186 - -
Gabi5016g00015 355 CDD DnaJ 67 121 IPR001623 -
Gabi5016g00015 355 SMART dnaj_3 66 124 IPR001623 -
Gabi5016g00015 355 MobiDBLite consensus disorder prediction 264 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5016g00015 Gabi-Chr5016 115337 116958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5016g00015 2 353 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 44.536 9.09e-98 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5016g00015 - - cam:101502408 474.937