Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5013g00003 ATGGAGCTATCAAGTTCCACACTCTACCTTTTGTTCACATTCGCCGTACTTTTTGTTCTTCGATCTCTTCTTGCAACAAAAAGCAGCAGCGACAAGAGTAAGAGCAAAACAAACACCAAGCTTCCACCAGGACCTACCCCACTTCCCATAATTGGAAACCTTCTCCAACTTGGGAACAAACCTCACCATTCATTAGCCAAACTTTCAGACATTCACGGACCAATTATGACCTTAAAATTAGGCCAAGTAACAACCATAGTCATATCTTCAGCTGACATGGCCAGAGAAGTGCTCCAAACCCATGATCTCTTACTCTCAAACAGAACCGTTCCTGATGCACTTTCAGTTCTCAACCATGACCAATACAGCTTGTCTTTCATGCGTGTTTCTCCTCGTTGGCGTGACCTTAGAAAAATCTGCAACAACAATTTATTCTCCAATAAAACACTTGATGCTAGCCAAGCACTCAGGCGCAAGAAGTTGAATGATCTATTAAATGACATCAACAAGTGCAGTGAAACTGGTGAAGCTGTGGATATTGGAAGAGCAGCTTTCAAGACAACGATAAATTTGTTGTCAAACACTTTTTTCTCTGCGGATTTTGTTCACTCTGCAGCTGAAGCAGGAGAGTATAAGGAGATTGTTGTGAGCATATTGAAAGAGGTTGGAGCACCTAACTTGTCTGATTTTTTCCCTGCTTTGAAGATGCTTGACTTGCAGGGTATCAGAAAACGCTCTATTGTTTCTGTTAAGAAAGTGTTGACTATCTTCCGTCGCTTCGTTAGTGAACGGATGAAGGTTAGGGAAGGAACAGGTTCTTCTTCAAATGATGACGTCCTTGATGCCTTGCTCAATATTTCTCAAGAGAATGGCAAGATTGAAATGGACAAAGATGAAATTGAACATTTGTTGCTGAACATATTTGTTGCGGGAACCGACACAACAACATATACACTAGAATGGGCAATGGCAGAGCTAATTCACAATCCAAAGATTATGTCAAAAGTGGAGAAAGAACTGGAGCAAGTTGTTGGCAAAGGTAACACTGTGGAAGAAACAGATGTTAGTAGGCTCCCTTACTTAAATGCAGTTATAAAAGAGACGTTCCGTGTGCATCCACCAGTTCCCTTATTGCTTCCCAGAAAGGCTGAGATTGATGTAGAAATTGGTGGCTACGTCATCCCAAAAGATGCACAAGTGTTGGTCAATGCTTGGGTTGTTGGTAGGGATCCAACTAAATGGGATAATCCAAATGTGTTTATACCTGAGAGGTTCTTGGACTCTGAAGTTGATATTAAAGGTCATCATTTTGAGCTCATACCATTTGGATCTGGACGAAGAATATGCCCTGGCTTGCCTTTGGCTGTTAGAATGTTGCCACTTATGTTGGGATCATTGGTCAATTGCTACAATTGGAAACTTGAGGAAGGCATAAACCTTGATGACTTGGACAAAGAAGATGAATATGGGATTACCTTAGAAAAATCTCAACCAGTTCGAATTGTTCCAACCAAAGTTAAGTAA 1524 0.4108 MELSSSTLYLLFTFAVLFVLRSLLATKSSSDKSKSKTNTKLPPGPTPLPIIGNLLQLGNKPHHSLAKLSDIHGPIMTLKLGQVTTIVISSADMAREVLQTHDLLLSNRTVPDALSVLNHDQYSLSFMRVSPRWRDLRKICNNNLFSNKTLDASQALRRKKLNDLLNDINKCSETGEAVDIGRAAFKTTINLLSNTFFSADFVHSAAEAGEYKEIVVSILKEVGAPNLSDFFPALKMLDLQGIRKRSIVSVKKVLTIFRRFVSERMKVREGTGSSSNDDVLDALLNISQENGKIEMDKDEIEHLLLNIFVAGTDTTTYTLEWAMAELIHNPKIMSKVEKELEQVVGKGNTVEETDVSRLPYLNAVIKETFRVHPPVPLLLPRKAEIDVEIGGYVIPKDAQVLVNAWVVGRDPTKWDNPNVFIPERFLDSEVDIKGHHFELIPFGSGRRICPGLPLAVRMLPLMLGSLVNCYNWKLEEGINLDDLDKEDEYGITLEKSQPVRIVPTKVK 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5013g00003 507 CDD CYP76-like 69 503 - -
Gabi5013g00003 507 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 319 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 362 380 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS E-class P450 group I signature 299 316 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 Gene3D Cytochrome P450 27 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 SUPERFAMILY Cytochrome P450 38 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS P450 superfamily signature 363 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 PRINTS P450 superfamily signature 310 327 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5013g00003 507 FunFam Cytochrome P450 76C4 33 502 - -
Gabi5013g00003 507 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 17 505 - -
Gabi5013g00003 507 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Gabi5013g00003 507 Pfam Cytochrome P450 42 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5013g00003 Gabi-Chr5013 82266 85127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5013g00003 3 505 Cytochrome P450 AT2G45550 45.776 1.01e-165 477
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5013g00003 - - qsa:O6P43_024265 601.282