Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5007g00006 ATGGGAATCTTTCCCTTATTGTATTACTCTTTCCTTTCCCTAGTTTTCCTTCAAATTTTCAAGTTTTTTCTTCAAAGCAGAAAATTCAGAAACCTTCCACCAGGTCCACTTTCTCGTCCCATAATTGGCAACCTCCACCACCTCGAACAACCACTTCACCGCACCTTCCAACGCATGTCACAAAAATATGGCCACATCTTTTCTCTCTGGTTCGGTTCCCGTCTTGCTATAATTGTTTCATCACCATCCGCATACCAAGAATGCTTCACCAAAAACGACATCGTCTTAGCAAATCGGCCACGCTCACTCTCAGGAAAGTACATCTTCTACAACTACACCACCGTAGGATCCTCCTCCTACGGCGAGCACTGGCGCAACCTCCGCCGTATCATTTCCCTTGATGTCCTTTCAACTCAACGTATTCACTCCTTCTCCGGAATCCGAAGGGATGAAGCGAATAGGTTGATGCATAAATTGGCCAGGGACACGTGCATGGACTTTGCAGTAGTGGAATTGAGTCAAGAGTTCCAGGACATGACATATAACAACATGATGAGGATGATATCAGGGAAGAGATACTATGGTGAAGAGAGTGGCATCAAGGATGTTGATGAAGCGAGGGAATTCAGAGAAACCGTAGCACAGTTGCTTCAATTTGGAGTGTCTAATAAGGCTGATTATTTGCCTTTCCTTAGGTTGTTTGATTATCAAAATGTGGAGAAGAGGCTACGGAATATTAGTAAGAGGTTTGATACGTTCTTGAATGCACTCATTCAAGAGCACCGTAGCAGGAAGCAGCGAGAAAATACCATGATAGACCATCTCTTGAATCTGCAAGAATCACAGCCTGAGTATTATACTGATCAAATCATCAAAGGGCTTGTTTTGGGTATGCTCTTTGCTGGAACAGACTCATCAACTACAACATTAGAGTGGGCAATAGCAAATTTATTAAATCATCCAGAGGCATTGAAGAAGGTAAGAGATGAATTGGACACACACATAGGGCAAGACCGATTCTTAGAGGAGTCAGACCTTTCAAAACTTCCTTACCTTAAGAATATCATCCTTGAGACTCTACGGTTGTATCCTCCGGCTCCACTGCTATTACCACACATGTCTTCAGATGACCTCAAAATTGAAGGATTCAATGTTCCACGAGACACTGTAGTGATGATTAATTGTTGGGCCATGCAAAGAGATCCTCAGTTGTGGAGTGAACCCACATGTTTTAAACCTGAGAGGTTTGATAAAGAAGGAGAGGAAAAAAAGTTAATTGCATTTGGATTAGGGAGAAGGGCTTGCCCGGGAGAAGCCTTGGCTATGCATAACGTTGGTTTGAATTTGGGATTATTGATTCAATGCTTTGACTGGAAACGAGTAAGTGAGGAAGAGATTGACATGACAGAGAAAAAGTGGTTTACCCTATCAAGGTTAGTTCCATTGAAGGCCATGTGTAAAGCTCGCCCACTCATCAACAAAATTTGA 1488 0.4267 MGIFPLLYYSFLSLVFLQIFKFFLQSRKFRNLPPGPLSRPIIGNLHHLEQPLHRTFQRMSQKYGHIFSLWFGSRLAIIVSSPSAYQECFTKNDIVLANRPRSLSGKYIFYNYTTVGSSSYGEHWRNLRRIISLDVLSTQRIHSFSGIRRDEANRLMHKLARDTCMDFAVVELSQEFQDMTYNNMMRMISGKRYYGEESGIKDVDEAREFRETVAQLLQFGVSNKADYLPFLRLFDYQNVEKRLRNISKRFDTFLNALIQEHRSRKQRENTMIDHLLNLQESQPEYYTDQIIKGLVLGMLFAGTDSSTTTLEWAIANLLNHPEALKKVRDELDTHIGQDRFLEESDLSKLPYLKNIILETLRLYPPAPLLLPHMSSDDLKIEGFNVPRDTVVMINCWAMQRDPQLWSEPTCFKPERFDKEGEEKKLIAFGLGRRACPGEALAMHNVGLNLGLLIQCFDWKRVSEEEIDMTEKKWFTLSRLVPLKAMCKARPLINKI 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5007g00006 495 PANTHER CYTOCHROME P450 82C3-RELATED 14 489 - -
Gabi5007g00006 495 Gene3D Cytochrome P450 21 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Gabi5007g00006 495 SUPERFAMILY Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 FunFam Cytochrome P450 family protein 23 492 - -
Gabi5007g00006 495 CDD CYP81 64 482 - -
Gabi5007g00006 495 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi5007g00006 495 Pfam Cytochrome P450 33 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5007g00006 Gabi-Chr5007 110649 112903 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5007g00006 3 495 Cytochrome P450 AT4G37370 51.406 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5007g00006 K13260 - gmx:100798269 771.155