Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5002g00003 ATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTAGGTGACTTAGGAAAGCCACTATGTAGTATGAACCTCGATGAGCTTCTAAAAAATATATGGACTGCTGAGTCAAACCAGTCCATTGGTATGGAAATTGAGGGCACAACTCAAGCTAGTGAAGCTGCTCTGCAGCATCAGGCTAGTCTGCCATTAACTAGTGCACTAAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAACAAAGCACAGATAACAAGGAGAAGAAATTGAGAGAGAGACAGCCTACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAGGCAGGGGTTGTTGCTGACGCGTCTAATAAAAAAAGTACTGGTCCTATAGTTGGTGTTAGCTCAAATGTAGCTGCACAACAGTTTCCTCCACAAGGTCCGTGGATACAATATCCGCAACCTCAATTTCAGCATCCACAACAAAGTTTAATGGGGGTTTATATGCCTAGCCAGAATATAGCACAGCCATTACACATGGGGGCTGGTGCTGCATTGGATGTTCCATATGCAGATGGTCAGGTGGCACTGCCTTCACCTATGATGGGAACCTTGTCAGATACAAAGCGACCTGGGAGAAAACGGGGCACACCAGAGGACATAGTAGAAAAGACTGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTATACAACTGAATTAGAGAACAAAGTCTCACATCTCGAAGAGGAAAACGAAAAACTGAGGAAACAGAAGGAGCTAGAGAACATGTGGTCCTGTGCTCCACCTCCTGAACCTAGATATCAGATTCGCCGAACAACATCGGCTTCATTCTGA 879 0.4505 MYSLTLDEVQNQLGDLGKPLCSMNLDELLKNIWTAESNQSIGMEIEGTTQASEAALQHQASLPLTSALSKKTVDEVWRDIQQSTDNKEKKLRERQPTLGEMTLEDFLVKAGVVADASNKKSTGPIVGVSSNVAAQQFPPQGPWIQYPQPQFQHPQQSLMGVYMPSQNIAQPLHMGAGAALDVPYADGQVALPSPMMGTLSDTKRPGRKRGTPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSHLEEENEKLRKQKELENMWSCAPPPEPRYQIRRTTSASF 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5002g00003 292 Pfam bZIP transcription factor 222 266 IPR004827 GO:0003700|GO:0006355
Gabi5002g00003 292 CDD bZIP_plant_BZIP46 222 276 - -
Gabi5002g00003 292 SUPERFAMILY Leucine zipper domain 222 267 IPR046347 GO:0003700|GO:0006355
Gabi5002g00003 292 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 225 240 IPR004827 GO:0003700|GO:0006355
Gabi5002g00003 292 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 220 272 - -
Gabi5002g00003 292 Coils Coil 245 268 - -
Gabi5002g00003 292 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 220 265 IPR004827 GO:0003700|GO:0006355
Gabi5002g00003 292 Gene3D - 220 273 - -
Gabi5002g00003 292 SMART brlzneu 218 274 IPR004827 GO:0003700|GO:0006355
Gabi5002g00003 292 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 1 290 IPR043452 GO:0003700|GO:0045893
Gabi5002g00003 292 MobiDBLite consensus disorder prediction 194 292 - -
Gabi5002g00003 292 MobiDBLite consensus disorder prediction 202 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5002g00003 Gabi-Chr5002 78596 91098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5002g00003 1 292 bZIP Transcription Factor Family AT3G56850 53.846 5.09e-90 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi5002g00003 bZIP_1 2.3e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5002g00003 K14432 - gmx:100784924 466.463