Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5002g00002 ATGGGGTCTCAAGGTGGTGGTGATAATAATGGAAAACATTCACAGCTCCAGCCATTGGTGCGGGAAAACTCAATGTACAGTCTCACACTTGATGAGGTTCAGAATCAATTAGGTGACTTAGGAAAGCCACTATGTAGTATGAACCTCGATGAGCTTCTAAAAAATATATGGACTGCTGAGTCAAACCAGTCCATTGGTATGGAAATTGAGGGCACAACTCAAGCTAGTGAAGCTGCTCTGCAGCATCAGGCTAGTCTGCCATTAACTAGTGCACTAAGCAAGAAGACAGTTGATGAGGTTTGGAGAGATATCCAACAAAGCACAGATAACAAGGAGAAGAAATTGAGAGAGAGACAGCCTACTTTGGGAGAGATGACATTGGAGGATTTCTTGGTGAAGGCAGGGGTTGTTGCTGACGCGTCTAATAAAAAAAGTACTGGTCCTATAGTTGGTGTTAGCTCAAATGTAGCTGCACAACAGTTTCCTCCACAAGGTCCGTGGATACAATATCCGCAACCTCAATTTCAGCATCCACAACAAAGTTTAATGGGGGTTTATATGCCTAGCCAGAATATAGCACAGCCATTACACATGGGGGCTGGTGCTGCATTGGATGTTCCATATGCAGATGGTCAGGTGGCACTGCCTTCACCTATGATGGGAACCTTGTCAGATACAAAGCGACCTGGGAGAAAACGGGGCACACCAGAGGACATAGTAGAAAAGACTGTTGAGAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGGCTTATACAACTGAATTAGAGAACAAAGTCTCACATCTCGAAGAGGAAAACGAAAAACTGAGGAAACAGAAGGAGCTAGAGAACATGTGGTCCTGTGCTCCACCTCCTGAACCTAGATATCAGATTCGCCGAACAACATCGGCTTCATTCTGA 951 0.4522 MGSQGGGDNNGKHSQLQPLVRENSMYSLTLDEVQNQLGDLGKPLCSMNLDELLKNIWTAESNQSIGMEIEGTTQASEAALQHQASLPLTSALSKKTVDEVWRDIQQSTDNKEKKLRERQPTLGEMTLEDFLVKAGVVADASNKKSTGPIVGVSSNVAAQQFPPQGPWIQYPQPQFQHPQQSLMGVYMPSQNIAQPLHMGAGAALDVPYADGQVALPSPMMGTLSDTKRPGRKRGTPEDIVEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSHLEEENEKLRKQKELENMWSCAPPPEPRYQIRRTTSASF 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5002g00002 316 Coils Coil 269 292 - -
Gabi5002g00002 316 Gene3D - 244 297 - -
Gabi5002g00002 316 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 21 314 IPR043452 GO:0003700|GO:0045893
Gabi5002g00002 316 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 244 289 IPR004827 GO:0003700|GO:0006355
Gabi5002g00002 316 MobiDBLite consensus disorder prediction 226 292 - -
Gabi5002g00002 316 MobiDBLite consensus disorder prediction 218 316 - -
Gabi5002g00002 316 SMART brlzneu 242 298 IPR004827 GO:0003700|GO:0006355
Gabi5002g00002 316 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 244 296 - -
Gabi5002g00002 316 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 249 264 IPR004827 GO:0003700|GO:0006355
Gabi5002g00002 316 CDD bZIP_plant_BZIP46 246 300 - -
Gabi5002g00002 316 SUPERFAMILY Leucine zipper domain 246 291 IPR046347 GO:0003700|GO:0006355
Gabi5002g00002 316 Pfam bZIP transcription factor 246 290 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5002g00002 Gabi-Chr5002 78596 91098 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5002g00002 17 316 bZIP Transcription Factor Family AT3G56850 53.746 1.09e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi5002g00002 bZIP_1 2.6e-14 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5002g00002 K14432 - gmx:100784924 514.612