Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5000g00011 ATGGCTGCGGAGCAGGGTGATGGATGCTCCTCCATCTGCGTACCCCTTCTGGGTGATGAAAAAGTGCATCAACTGAATGACTCAAATATTGACGATGTGGCCAAAACTGGTGATCTACACTGCACACTTCATGTGGGTAACACGTCCTTTTTCAAGACCTGCTTCCATCTTATTAATGCCATCTCAGGAGTTGGTATTTTATCGATACCTTATGCATTGGCATCTGGGGGATGGTTAAGCATATCACTGCTATTTGTGATTGCCATTGCTTGCTGTTACACTGGCATATTGGTCAAAAGATGCATGGATATGGATCCTGATATCAGGACCTTTCCTGACATAGGTCAACATGCATTTGGAGACAAGGGTAGGCTAATAGTATCAATTGCCATGAATTCTGAGCTCTACCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGACAATCTAAACAAACTAGTACCAAACATGCAACTAGACCTTGCAGGGTTAACACTTAGTGGTACAACAATTTTTACCATAATTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACCTGAGCCTGCTATCTTTTGTATCTGCTACTGGGGCTTTAGCTTCTTCCATCTTCATCCTCTCTCTATTTTGGAATGGCACCATTGATGGAACTGGATTTCGTGGAAAGGGAACACTTTTTAGATGGAGTGGAATACCTTCTGCTGTCAGTTTATATGCCTTCTGTTATAGTGCTCATCCAATCCTTCCCACCCTCTACAATGGCATGAGAAACAAAAGTCAGTTCTCCAATGTCCTATTTGTATGCTTTTTACTATGTACTCTTGGTTATGCAGCAGCAGCTATTTTGGGGTACTTAATGTTTGGAGAGGAGGTTGAATCACAGGTGACTTTGAACCTACCAACAGGCAAGTTCAGTTCACAAGTTGCAATATACACTACCTTGGTCAATCCCATAGCCAAATATGCATTGATGATTACTCCTGTCATGAATGCTATAAAAAATAAAGTTTCATGTCATTACAGCAAAAGGCTCACTCATATGCTTGTTAGTACTTCATTGCTCATTAGTACTCTTATTGTAGCCGTGGCCATTCCCTTATTTGGATACCTCATGTCACTTGTTGGAGCATTACTAAGCGTCTCGGCTTCAATTTTATTGCCATCAGTGTGCTACTTGAAAATTTCAGGAGCTTACAAGAGATTTGGGTCTGAAATGATCATCAATTATTCAATAATATTAATGGGGGTTACTATTGCTGTTGTAGGTACTTACGCATCTCTTATGGATATAGTTCAGAATTTATAA 1311 0.4035 MAAEQGDGCSSICVPLLGDEKVHQLNDSNIDDVAKTGDLHCTLHVGNTSFFKTCFHLINAISGVGILSIPYALASGGWLSISLLFVIAIACCYTGILVKRCMDMDPDIRTFPDIGQHAFGDKGRLIVSIAMNSELYLVVTGFLILEGDNLNKLVPNMQLDLAGLTLSGTTIFTIIAALVILPTVLLEDLSLLSFVSATGALASSIFILSLFWNGTIDGTGFRGKGTLFRWSGIPSAVSLYAFCYSAHPILPTLYNGMRNKSQFSNVLFVCFLLCTLGYAAAAILGYLMFGEEVESQVTLNLPTGKFSSQVAIYTTLVNPIAKYALMITPVMNAIKNKVSCHYSKRLTHMLVSTSLLISTLIVAVAIPLFGYLMSLVGALLSVSASILLPSVCYLKISGAYKRFGSEMIINYSIILMGVTIAVVGTYASLMDIVQNL 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5000g00011 436 PANTHER OS05G0424000 PROTEIN-RELATED 54 422 - -
Gabi5000g00011 436 Pfam Transmembrane amino acid transporter protein 47 429 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5000g00011 Gabi-Chr5000 87456 98174 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5000g00011 44 433 Amino Acid or Auxin Permease AAAP Family AT3G28960 56.522 1.94e-160 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5000g00011 K15015 - gmx:100784690 706.057