Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi5000g00010 ATGGCTGCGGAGCAGGGTGATGGATGCTCCTCCATCTGCGTACCCCTTCTGGGTGATGAAAAAGTGCATCAACTGAATGACTCAAATATTGACGATGTGGCCAAAACTGGTGATCTACACTGCACACTTCATGTGGGTAACACGTCCTTTTTCAAGACCTGCTTCCATCTTATTAATGCCATCTCAGGAGTTGGTATTTTATCGATACCTTATGCATTGGCATCTGGGGGATGGTTAAGCATATCACTGCTATTTGTGATTGCCATTGCTTGCTGTTACACTGGCATATTGGTCAAAAGATGCATGGATATGGATCCTGATATCAGGACCTTTCCTGACATAGGTCAACATGCATTTGGAGACAAGGGTAGGCTAATAGTATCAATTGCCATGAATTCTGAGCTCTACCTAGTTGTAACAGGTTTTCTGATTTTAGAGGGTGACAATCTAAACAAACTAGTACCAAACATGCAACTAGACCTTGCAGGGTTAACACTTAGTGGTACAACAATTTTTACCATAATTGCTGCCCTTGTTATTTTGCCTACTGTTTTGTTAGAGGACCTGAGCCTGCTATCTTTTGTATCTGCTACTGGGGCTTTAGCTTCTTCCATCTTCATCCTCTCTCTATTTTGGAATGGCACCATTGATGGAACTGGATTTCGTGGAAAGGGAACACTTTTTAGATGGAGTGGAATACCTTCTGCTGTCAGTTTATATGCCTTCTGTTATAGTGCTCATCCAATCCTTCCCACCCTCTACAATGGCATGAGAAACAAAAGTCAGTTCTCCAATGTCCTATTTGTATGCTTTTTACTATGTACTCTTGGTTATGCAGCAGCAGCTATTTTGGGGTACTTAATGTTTGGAGAGGAGGTTGAATCACAGGTGACTTTGAACCTACCAACAGGTACTTACGCATCTCTTATGGATATAGTTCAGAATTTATAA 951 0.4164 MAAEQGDGCSSICVPLLGDEKVHQLNDSNIDDVAKTGDLHCTLHVGNTSFFKTCFHLINAISGVGILSIPYALASGGWLSISLLFVIAIACCYTGILVKRCMDMDPDIRTFPDIGQHAFGDKGRLIVSIAMNSELYLVVTGFLILEGDNLNKLVPNMQLDLAGLTLSGTTIFTIIAALVILPTVLLEDLSLLSFVSATGALASSIFILSLFWNGTIDGTGFRGKGTLFRWSGIPSAVSLYAFCYSAHPILPTLYNGMRNKSQFSNVLFVCFLLCTLGYAAAAILGYLMFGEEVESQVTLNLPTGTYASLMDIVQNL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi5000g00010 316 Pfam Transmembrane amino acid transporter protein 47 313 IPR013057 -
Gabi5000g00010 316 PANTHER OS05G0424000 PROTEIN-RELATED 54 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi5000g00010 Gabi-Chr5000 87452 98174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi5000g00010 44 316 Amino Acid or Auxin Permease AAAP Family AT3G28960 54.945 5.54e-106 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi5000g00010 K15015 - gmx:100784690 514.998