Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi498g00003 ATGGGTAACGTAGATTGTGTGTACCCTTCGGGAATGAACGTTGAAAGTGCAAACCGTGTGGAGGTTCCACCGCCTCAGCCATTTTCGAAGTCTCTAAAGTACTCTTTAAAGGAGACATTTTTTCCAGATGATCCTTTAAGGAGGTTTAAGAACCAAACAGCATCAAAGAGATTGGTGATTGGGCTTCAGTACTTCTTCCCAATCTTTGAGTGGGGACCACGCTACACCTTTCAGTTCTTGAAATCTGATCTTATAGCTGGCATCACCATCGCTAGCTTGGCTATTCCACAAGGCATCAGTTATGCCAAGCTCGCCAACCTCCCTCCAATTCTTGGACTATATTCGAGCTTTATACCACCGTTGATTTATGCCATGATGGGTAGTTCAAGGGATTTGGCAGTGGGGACTGTGGCCGTTGGATCGCTTCTCATGGGTTCCATGTTGAGTAATGAGGTTAATCCCAACGAAAACCCAAAGCTTTTCCTCCACCTTGCTTTCACTGCAACATTCTTTGCTGGAGTTTTGCAAGCTGCATTGGGTCTGTTTAGGTTAGGTTTTATCGTGGATTTTTTGTCACATGCAACCATAGTAGGGTTCATGGGAGGAGCAGCCACGGTGGTTTGCCTGCAGCAGCTAAAATCGATTCTGGGCCTTGAGCATTTCACACATGGGGCTGATCTTGTATCAGTGATGCGCTCTGTTTTTAGCCAAACTCATCAGTGGAGGTGGGAAAGCGCTGTGTTAGGGTGTTGCTTCATTTTCTTCCTACTTGTCACAAGATACTTCAGCAAAAAGCAACCAAGGTTTTTTTGGGTGTCAGCAATGGCACCGTTGACGTCCGTTATACTGGGAAGTCTGCTGGTTTATTTCACTCACGCCGAGAAGCACGGCGTTCAAGTGATAGGAGAATTGAAGAAGGGGCTAAATCCACCATCTCTCACACATTTGGTATTTGTGTCGCCTTATATGACCACAGCTATCAAAACAGGCCTTGTCGTTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGAACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCAGCCGTGAACTACAATGCTGGATGCAAGACTGCGGTGTCAAACATTGTAATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACTCCCTTGGTGGTGCTATCAGCCATAATTGTATCAGCAATGCTTGGCCTTATAGATTATCAAGCTGCCATCCATCTGTGGAAGGTTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATATATTGGCGTGGTGTTTGGCAGTGTTGAAATCGGTTTAGTCATAGCAGTTGCAATATCTGTACTTCGGGTACTTTTATTTGTTGCAAGGCCAAGGACACATGTTTTGGGCAACATTCCAAATTCTGTTATATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTTCTGGAATCCTAATTCTACAGATTGATGCACCAATTTATTTTGCCAATGCAAGTTATTTGAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATTAAAACTGCAGGGGAGACAAGTTTGCAGTATGTAATAATGGATATGAGTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTGAAGAAGATTGCAGACAGAAGAGGGCTACAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTGAACAAATCCAAGGTCCAAGAACATATAGGGCAGAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGAGCATGCAACTTCATGCTCCATGCTTGCAAACCGAATCCCAGGAAAGATGAATCAGAGGGTTGGAACAATGTCTGA 1971 0.4348 MGNVDCVYPSGMNVESANRVEVPPPQPFSKSLKYSLKETFFPDDPLRRFKNQTASKRLVIGLQYFFPIFEWGPRYTFQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMGSMLSNEVNPNENPKLFLHLAFTATFFAGVLQAALGLFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHGADLVSVMRSVFSQTHQWRWESAVLGCCFIFFLLVTRYFSKKQPRFFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGELKKGLNPPSLTHLVFVSPYMTTAIKTGLVVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKVDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFVARPRTHVLGNIPNSVIYRNVEQYPNAKHVSGILILQIDAPIYFANASYLRERITRWIDEEEDRIKTAGETSLQYVIMDMSAVGNIDTSGISMLEEVKKIADRRGLQLVLVNPGSEVMKKLNKSKVQEHIGQKWIYLTVEEAVGACNFMLHACKPNPRKDESEGWNNV 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi498g00003 656 Gene3D STAS domain 491 636 IPR036513 -
Gabi498g00003 656 PANTHER SULFATE TRANSPORTER 29 637 IPR001902 GO:0016020|GO:0055085
Gabi498g00003 656 Pfam Sulfate permease family 80 460 IPR011547 GO:0016020
Gabi498g00003 656 ProSiteProfiles STAS domain profile. 511 634 IPR002645 -
Gabi498g00003 656 NCBIfam sulfate permease 67 630 IPR001902 GO:0016020|GO:0055085
Gabi498g00003 656 FunFam Sulfate transporter 31 491 637 - -
Gabi498g00003 656 ProSitePatterns SLC26A transporters signature. 109 130 IPR018045 GO:0008271|GO:0008272
Gabi498g00003 656 Pfam STAS domain 512 630 IPR002645 -
Gabi498g00003 656 SUPERFAMILY SpoIIaa-like 513 634 IPR036513 -
Gabi498g00003 656 CDD STAS_SulP_like_sulfate_transporter 512 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi498g00003 Gabi-Chr498 70096 76644 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi498g00003 18 656 Inorganic Solute Cotransporters AT4G02700 69.219 0.0 927
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi498g00003 K17471 - gmx:100804670 1158.67