Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi498g00001 ATGTGGGTCAATATAGGAGAATTGAAGAAGGGGCTCAATCCACCATCTCTCACAGATTTGGTATTTGTGTCGCCTTATTTGACAACAGCTATCAAAACAGGCCTTGTCGTTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGAAGAAGCTTTGCAATGTTTAAAAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGACCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACAACAGGGCCATTTTCGCGTTCAGCCGTGAACTATAATGCTGGATGCAAAACTGCGGTGTCAAACATTGTAATGTCAATTGCAGTCATGTTGACATTGTTATTCCTAACACCCTTGTTCCATTACACTCCCTTGGTGGTGCTATCAGCCATAATTGTATCAGCAATGCTTGGCCTTATAGATTATCAAGCTGCCATCCATCTGTGGAAGGTTGACAAATTTGATTTTGTCGTGTGCATGAGTGCATATATTGGCGTGGTGTTTGGCAGTGTTGAAATCGGTTTAGTCATAGCAGTTGCAATATCTGTACTTCGGGTACTTTTATTTGTTGCAAGGCCAAGGACACATGTTTTGGGCAACATTCCAAATTCTGTTATATACAGAAATGTTGAGCAATATCCAAATGCAAAACATGTTTCTGGAATCCTAATTCTACAGATTGATGCACCAATTTATTTTGCCAATGCAAGTTATTTGAGAGAAAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGAATTAAAACTGCAGGGGAGACAAGTTTGCAGTATGTAATAATGGATATGAGTGCTGTTGGGAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGGTCAAGAAGATTGCAGACAGAAGAGGACTACAACTTGTTTTGGTCAATCCTGGAAGCGAGGTGATGAAGAAACTGAACAAATCCAAGGTCCAAGAACATATAGGGCAGAAATGGATCTATCTGACAGTTGAAGAGGCTGTTGGAGCATGCAACTTCATGCTCCATGCTTGCAAACCGAATCCCAAGAAAGACGAATCAGAGGGTTGGAACAATGTCTGA 1083 0.41 MWVNIGELKKGLNPPSLTDLVFVSPYLTTAIKTGLVVGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIVGSFTSCYLTTGPFSRSAVNYNAGCKTAVSNIVMSIAVMLTLLFLTPLFHYTPLVVLSAIIVSAMLGLIDYQAAIHLWKVDKFDFVVCMSAYIGVVFGSVEIGLVIAVAISVLRVLLFVARPRTHVLGNIPNSVIYRNVEQYPNAKHVSGILILQIDAPIYFANASYLRERITRWIDEEEDRIKTAGETSLQYVIMDMSAVGNIDTSGISMLEEVKKIADRRGLQLVLVNPGSEVMKKLNKSKVQEHIGQKWIYLTVEEAVGACNFMLHACKPNPKKDESEGWNNV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi498g00001 360 SUPERFAMILY SpoIIaa-like 217 338 IPR036513 -
Gabi498g00001 360 Gene3D STAS domain 195 340 IPR036513 -
Gabi498g00001 360 Pfam Sulfate permease family 2 164 IPR011547 GO:0016020
Gabi498g00001 360 PANTHER SULFATE TRANSPORTER 5 341 IPR001902 GO:0016020|GO:0055085
Gabi498g00001 360 ProSiteProfiles STAS domain profile. 215 338 IPR002645 -
Gabi498g00001 360 Pfam STAS domain 216 334 IPR002645 -
Gabi498g00001 360 CDD STAS_SulP_like_sulfate_transporter 216 331 - -
Gabi498g00001 360 FunFam Sulfate transporter 31 195 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi498g00001 Gabi-Chr498 17297 24375 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi498g00001 5 360 Inorganic Solute Cotransporters AT4G02700 70.225 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi498g00001 K17471 - gmx:100810196 636.336