Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4985g00006 ATGGCGTTCCCAGACTCTTCTCGTCGCAACTCTCTGATCCCGACCTTCCTTTATTCCTCCTCTTCTTCATCTCCGAAAACCCTACCTCTGCACAAGATCCTCAGCTCCGGCGCCGCCGGAGCCGCCTCGCCGCCTTCCGGCATCGACGGCGGATCGCGCGGGAGTAGCTTCATGATTCCTGCTCCCAGCGAGCCTGGCAAGATCGAGATGTACTCGCCGGCGTTCTACGCCGCCTGCACCGTCGGTGGAATCCTCAGCTGTGGCCTCACTCACATGGCCGTCACTCCTCTTGATCTCGTCAAGTGTAACATGCAGATTGACCCTGCTAAGTACAAGAGCATCTCGTCTGGGTTTGGAGTTTTGCTCAAGGAGCAGGGATTCAAGGGCTTCTTCCGCGGCTGGGTGCCTACCTTGCTCGGTTACAGTGCACAGGGTGCTTGCAAGTTTGGGTTCTATGAGTTCTTTAAGAAATATTATTCTGATATTGCTGGTCCAGAGTATGCAAGCAAGTACAAGACCTTGATCTACCTTGCTGGTTCCGCATCTGCGGAGGTTATTGCTGATGTTGCACTCTGCCCCTTTGAGGCTGTGAAGGTCCGTGTCCAAACTCAGCCCGGTTTTGCGAGAGGTCTGTCTGACGGGATGCCAAAATTTGTTAAATCTGAAGGAACCTTAGGGCTCTACAAGGGATTAGTGCCTCTGTGGGGACGTCAGATTCCATACACTATGATGAAGTTTGCTTCTTTTGAGACCATCGTTGAGATGATCTATAAGCATGCCATCCCCAGACCAAAGAATGAGTGCAGCAAAGGTCTGCAACTCGGTGTCAGTTTTGCTGGTGGATATATAGCCGGTGTACTTTGTGCAATTGTGTCTCATCCTGCTGATAATCTTGTCTCTTTTCTGAACAATGCCAAAGGAGCAACAGTTGGTGATGCGGTGAATAAGATGGGTTTGATGGGTCTCTTTACTCGTGGTCTTCCTCTCCGTATTGTTATGATTGGAACACTTACTGGAGCCCAGTGGGGAATATACGATGCATTCAAAGTCTTTGTGGGACTGCCAACCACTGGTGGTCCTGCTCCTGCTGCTCCTGCCCCTGCTCCTGCTGTTGAGCTTGCAAAGACATAG 1131 0.5137 MAFPDSSRRNSLIPTFLYSSSSSSPKTLPLHKILSSGAAGAASPPSGIDGGSRGSSFMIPAPSEPGKIEMYSPAFYAACTVGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGFKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYASKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGMPKFVKSEGTLGLYKGLVPLWGRQIPYTMMKFASFETIVEMIYKHAIPRPKNECSKGLQLGVSFAGGYIAGVLCAIVSHPADNLVSFLNNAKGATVGDAVNKMGLMGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPAPAPAVELAKT 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4985g00006 376 Pfam Mitochondrial carrier protein 173 259 IPR018108 -
Gabi4985g00006 376 Pfam Mitochondrial carrier protein 77 160 IPR018108 -
Gabi4985g00006 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 272 351 IPR018108 -
Gabi4985g00006 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 74 158 IPR018108 -
Gabi4985g00006 376 Gene3D Mitochondrial carrier domain 75 352 IPR023395 -
Gabi4985g00006 376 ProSiteProfiles Solute carrier (Solcar) repeat profile. 171 255 IPR018108 -
Gabi4985g00006 376 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 55 362 IPR044677 GO:0005315|GO:1990547
Gabi4985g00006 376 SUPERFAMILY Mitochondrial carrier 77 347 IPR023395 -
Gabi4985g00006 376 FunFam Phosphate carrier protein, mitochondrial 74 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4985g00006 Gabi-Chr4985 89208 92726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4985g00006 6 375 Chloroplast and Mitochondria Gene Families AT5G14040 79.630 0.0 587
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4985g00006 K15102 - gmx:548006 622.083