Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4983g00009 ATGGCCGCAGAAATTTGTGGCAGGTCTCTACTCTTATCCGTTAAAACCCAAACATTCCTCCATGCTCAACGAACCAGAGCAACAACGAGAACAAGCACTACGAGATTCCACTCATCCAAATCTCCTCTTTATTCTCGCTCTTCAAATGCCTCCACCTTTCGCCACGGCGGCGCCTCCGTCTTCTGCCGTGTTGCTAGCACCGAGACACTCTCCGACTTCGAATCCGCCGTCAAAGCTGGCAAGGATCGTCTATCTAAGGTGCCGGTGTCTAATATAAGGAACTTTAGCATCATTGCTCATATTGACCATGGGAAATCCACCTTGGCGGATAAGTTGCTTCAGGTCACTGGCACTGTGCACCAGCGAGACATGAAGGATCAGTTCCTCGATAACATGGATTTGGAGAGAGAAAGAGGCATCACTATTAAGCTGCAGGCAGCTCGAATGCGTTATGTGTCTGAAAATGAACCATATTGCTTAAATCTAATAGATACACCGGGGCATGTCGACTTCTCGTATGAGGTTTCTCGATCACTCGCAGCATGTGAGGGTGCTCTCCTTGTAGTAGATGCTTCTCAGGGGGTTGAGGCACAAACACTAGCTAATGTTTATTTGGCTATGGAGAACAACCTAGAAGTTATCCCTGTTTTGAACAAAATAGATCTTCCAGGTGCAGAACCAGATCGAGTTATCAAGGAGATTGAAGAGGTTGTAGGTCTAGATTGTAACAACGCTATTCTCTGCTCTGCAAAGGAAGGAGTAGGCATAATTGATATTCTCAATGCAATTGTTGCAAGAATTCCCCCACCTGCTGATACATCTAAAAGGCCATTGAGGGCTTTAATATTTGATAGTTACTATGATCCATACAGAGGTGTTATTGTATACTTTCGAGTTGTAGATGGGACTATAAAGAAAGGTGACAGAGTTTATTTTATGGCTAGTGGGAAGGATTATTTTGCTGATGAAATTGGAGTTTTGTCTCCCAATCAATTACAAGTTGAAGAATTGTATGCTGGTGAGGTGGGCTATCTATCTGCATCTATAAGAACAGTAGCTGATGCTAGAGTGGGTGACACTATTACTCACTATGGAAGAAAGGCAGATAATTCACTCCCTGGATATGAGGAAGCCACTCCTATGGTGTTCTGTGGCCTGTTTCCTGTTGATGCTGACCAATTTCCTGATCTTCGTGATGCACTTGAGAAGCTACAACTCAACGATGCTGCTCTGAAGTTTGAACCTGAGACCTCAAGTGCCATGGGATTTGGCTTTAGATGTGGGTTTCTGGGTCTTCTCCACATGGAAATAGTTCAGGAGAGACTTGAGAGAGAATACAATCTGAGCCTGATAACTACTGCTCCAAGTGTTGTATACAAAGTGAACTTTGTAAATGGTGATACTGTTGAATGCTCAAATCCATCTTTACTTCCCGAGCCTGGAAAAAGGAAATCAATTGAGGAGCCATTTGTCAAGATTGAGATGCTTACACCAAAGGACTACATTGGTTCGCTTATGGAACTGGGACAAGAGAGAAGAGGGCAGTTCAAAGAAATGAAATTTATAACTGAAAATAGGGCATCGCTCACCTATGAATTACCCCTAGCCGAGATGGTTGGTGATTTCTTTGACCAGTTGAAGTCAAGAAGTAAGGGTTACGCTAGTATGGAGTATAACTTCGTCGGATACAAAGAAAGTGATTTAATTAAACTTGACATACTGATAAACGGTGATTGTGTGGAGCCATTGGCTACAATTGTGCACAAAGATAAGTGGGAAGAGAACCATAGTAGACCCGGGAAACCCTGTTGCCAGTCTATCCCATGA 1827 0.4346 MAAEICGRSLLLSVKTQTFLHAQRTRATTRTSTTRFHSSKSPLYSRSSNASTFRHGGASVFCRVASTETLSDFESAVKAGKDRLSKVPVSNIRNFSIIAHIDHGKSTLADKLLQVTGTVHQRDMKDQFLDNMDLERERGITIKLQAARMRYVSENEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQGVEAQTLANVYLAMENNLEVIPVLNKIDLPGAEPDRVIKEIEEVVGLDCNNAILCSAKEGVGIIDILNAIVARIPPPADTSKRPLRALIFDSYYDPYRGVIVYFRVVDGTIKKGDRVYFMASGKDYFADEIGVLSPNQLQVEELYAGEVGYLSASIRTVADARVGDTITHYGRKADNSLPGYEEATPMVFCGLFPVDADQFPDLRDALEKLQLNDAALKFEPETSSAMGFGFRCGFLGLLHMEIVQERLEREYNLSLITTAPSVVYKVNFVNGDTVECSNPSLLPEPGKRKSIEEPFVKIEMLTPKDYIGSLMELGQERRGQFKEMKFITENRASLTYELPLAEMVGDFFDQLKSRSKGYASMEYNFVGYKESDLIKLDILINGDCVEPLATIVHKDKWEENHSRPGKPCCQSIP 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4983g00009 608 CDD LepA 93 270 - -
Gabi4983g00009 608 CDD EF4_II 278 363 - -
Gabi4983g00009 608 FunFam Translation factor GUF1, mitochondrial 373 454 - -
Gabi4983g00009 608 FunFam Elongation factor 4 89 272 - -
Gabi4983g00009 608 Pfam Elongation factor Tu domain 2 292 362 IPR004161 GO:0005525
Gabi4983g00009 608 SUPERFAMILY EF-G C-terminal domain-like 486 580 IPR035647 -
Gabi4983g00009 608 Hamap Elongation factor 4 [lepA]. 87 608 IPR006297 GO:0005525
Gabi4983g00009 608 Gene3D - 89 272 IPR027417 -
Gabi4983g00009 608 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 295 IPR027417 -
Gabi4983g00009 608 CDD lepA_C 488 567 IPR035654 -
Gabi4983g00009 608 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 90 271 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 130 145 IPR031157 -
Gabi4983g00009 608 SUPERFAMILY Translation proteins 269 374 IPR009000 -
Gabi4983g00009 608 PANTHER TRANSLATION FACTOR GUF1-RELATED 71 594 IPR006297 GO:0005525
Gabi4983g00009 608 NCBIfam translation elongation factor 4 91 594 IPR006297 GO:0005525
Gabi4983g00009 608 SMART EFG_C_a 485 573 IPR000640 -
Gabi4983g00009 608 PRINTS GTP-binding elongation factor signature 137 145 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 PRINTS GTP-binding elongation factor signature 94 107 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 PRINTS GTP-binding elongation factor signature 213 222 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 Gene3D Translation factors 273 372 - -
Gabi4983g00009 608 FunFam Translation factor GUF1, mitochondrial 273 371 - -
Gabi4983g00009 608 NCBIfam small GTP-binding protein domain 93 262 IPR005225 GO:0005525
Gabi4983g00009 608 Pfam Elongation factor Tu GTP binding domain 91 268 IPR000795 GO:0003924|GO:0005525
Gabi4983g00009 608 Gene3D - 567 598 IPR038363 -
Gabi4983g00009 608 CDD EF4_III 380 455 - -
Gabi4983g00009 608 Pfam Elongation factor G C-terminus 486 572 IPR000640 -
Gabi4983g00009 608 SUPERFAMILY EF-G C-terminal domain-like 379 457 IPR035647 -
Gabi4983g00009 608 FunFam Translation factor GUF1, mitochondrial 455 565 - -
Gabi4983g00009 608 Gene3D Elongation Factor G (Translational Gtpase), domain 3 373 454 - -
Gabi4983g00009 608 Gene3D - 455 566 - -
Gabi4983g00009 608 MobiDBLite consensus disorder prediction 30 50 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4983g00009 Gabi-Chr4983 98159 110090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4983g00009 91 325 Eukaryotic Initiation Factors Gene Family AT3G22980 33.871 9.71e-26 110