Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4982g00002 ATGAAGGTGGCAGCTATGATTCCAGGAAAGACTGTAGGTGATGTGATCAAACAGTACAGGGAACTGGAAGAAGATGTGAGTGTCATTGAATCTGGGCTGATTCCAGTTCCTGGTTACACTACTAGTTCTTTCACGTTGGAGTGGGTTAACAATCAAGGCTTTGATGAGTTCAATCAATTTTATAATGTTGCTGGCAAAAGGGGCACTTCCACTCGGCCATCTGAACAGGAAAGGAAGAAAGGAGTGCCGTGGACTAAAGAGGAGCATAGGCTATTTCTGATGGGTCTGAAGAAGTATGGTAAAGGAGATTGGAGAAACATCTCTCGTAATTTTGTGACCACAAGGACACCAACTCAGGTTGCAAGTCATGCTCAGAAGTATTTCATAAGGCAACTTACTGGAGGGAAGGATAAGAGGAGATCCAGCATCCATGACATCACAATGGTCAATCTCCCAGAAACAAAATCTCCTTCATCAGACAGTAACATACCTCCTTCTCCAAATCAATCACTGAAGGTTTTGAATCCACATCAGAATCAGAAATTGTCTAGCATGGTTAAACAGGAATATGACTTCAAATTTCCAAATGAGGGCATGTCTATGCTTTTTGATTCCACAAATGGAAACATGTTCATGACACCACTGCGTGGGAATTCTTTATATGGATCTAAACCACAGGAGCAATGTTTACTCAGAGGAACTCTCCATGGAAGCCAATTGGGCCCTTATGATACTATTATGCAAATGCAATCGATGCAACATCAGTGA 768 0.4193 MKVAAMIPGKTVGDVIKQYRELEEDVSVIESGLIPVPGYTTSSFTLEWVNNQGFDEFNQFYNVAGKRGTSTRPSEQERKKGVPWTKEEHRLFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITMVNLPETKSPSSDSNIPPSPNQSLKVLNPHQNQKLSSMVKQEYDFKFPNEGMSMLFDSTNGNMFMTPLRGNSLYGSKPQEQCLLRGTLHGSQLGPYDTIMQMQSMQHQ 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4982g00002 255 MobiDBLite consensus disorder prediction 148 168 - -
Gabi4982g00002 255 Gene3D - 82 132 - -
Gabi4982g00002 255 FunFam transcription factor MYB1R1 82 133 - -
Gabi4982g00002 255 ProSiteProfiles Myb-like domain profile. 76 128 IPR001005 -
Gabi4982g00002 255 SUPERFAMILY Homeodomain-like 77 131 IPR009057 -
Gabi4982g00002 255 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 2 190 IPR043363 -
Gabi4982g00002 255 Gene3D - 1 36 - -
Gabi4982g00002 255 NCBIfam myb-like DNA-binding domain, SHAQKYF class 79 131 IPR006447 GO:0003677
Gabi4982g00002 255 CDD SANT 83 128 IPR001005 -
Gabi4982g00002 255 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 132 IPR017930 -
Gabi4982g00002 255 Coils Coil 249 255 - -
Gabi4982g00002 255 SMART sant 80 130 IPR001005 -
Gabi4982g00002 255 ProSiteProfiles SANT domain profile. 84 132 IPR017884 -
Gabi4982g00002 255 Pfam Myb-like DNA-binding domain 83 128 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4982g00002 Gabi-Chr4982 56291 58306 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4982g00002 Myb_DNA-binding 3.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4982g00002 - - qsa:O6P43_026398 406.757