Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00115 ATGTGTAATAAAGGGTTTCAATGCTTGAGCGAGTCTGAGAGTGTAATTGAATATCGACAACACTTGTTGATGGATAGTCCCACAGCGGTTCGATTGCTGGCTACTGGTTCCGGTTCAGCACCCGGTTCCGGCGATGATAGCCGGCGTGTTAAGTTCTTGTGTAGCTTTCTGGGGAGTATAATGCCCCGTCCCCAAGATGGGAAGCTTCGTTATGTTGGTGGAGAGACACGTATTGTGAGTGTTCCAAGAGATATTAGCTATGATGAGTTGATGGGAAAGATGAGAGAGCTGTATGAAGGGGCAGCTGTGTTGAAGTACCAGCAGCCTGATGAGGATCTTGATGCCCTTGTCTCTGTTGTCAATGATGATGATGTGGTTAACATGATGGAAGAGTATGACAAGTTGGGGTCAGGGGATGGGTTCACTAGGCTCAGGGTTTTCTTGTTTTCGCAATCTGAGCAGGATGGTTCCTCTCACTTCATTGATGGGGATGAATCTGAGAGGAGGTATGTTGATGCATTGAATAGTTTAAATGATGCTTCTGACTTTAGGAGGTTGCAGCAAGCGGAGTTTGCTATGGTTGGCCCTGTTGAGGATATCCATGTGGCTGATCAGTTCTTTAATCGACTCAGTGTGGATAGTGGAATTCCTAGCCAGAGAAGTGGGGAACTATCTATGTCACAGTACAATTTGCATCATCTCACGATCCAGCACCAGCCATCTATTGGCCAGAGATATAGTGAAATGGATACTTCGTGGAATCCTGCTTATTACTCTCCTAGGCATCATGGTCACCATGCTGAATTTCCATCTTCTCCTTCTGGTACAAGGTACCGTGTGCCATTTCCTGAGTTACCAGATAAGGGCATTGATAGAGTTTCGGATGAGTATGCTCGGCATCATGTGAATCACCATCCTGTGTATGACAATCAACCGCAATATTCTGAAAATGTTGTGTGGTTGCCAACTGGAGCAGCACATGGTGAGAAGTCGGGTTTTCCGGGCAACATTCTTCATGGCCCCCATGTTCTTGATGGGAACAGTATATGTGAGCAATGTCGCATGAGTTTTCCGAGAGGTCAACCAGCTGTGGAGCATCCTAATGTTAGTAATGGACTTCCACTGGTTGCTAATCCATGTGCAGAATGCCCCTCAAACAGGGATAGTTTCACGGTGAATGCTGATGCAAAGTTACATCCTATGATCTATCCAAATGATCTTAATAATGATCATAGGTCTATTTATAGTGATACCCAGAATCATGAGAGAGGATGGGGTTTGCAGCATCAGACAACTGCTCGGGTTGAGGAATCAAGAGGGCATGTCTCTGGATCTGGAAGATTGAGTGATCATTATGTCAGCGATATTCCTGTTATAAATTTCTCTCCGGGGCATGATAGTGTGACTGATGGACATACTACGTCTTCCAATTATGCTCCTCAACGGGCTGCTCCTGAATTGGGAGCTGAACTCTTTCCTGACCAAACTGTGGCTGCTATACCACATCTACAAATTCCTCCCCTGGAAGAGCACAATGTGCGGTATGGAAATCCATCTTCTCCTTATGGAGTAGATAGTAATTACGCTTGTGGTCACGTACCTGGGCATGCTTTCAGGAGAAATGCTCCAACTCCAGTTCATATTGGACCCACTTATGAGACAACCACTCCACCTCAGCAGGTGAATGGTATGATAAATGCTGGATTAATCAGGGGAGAGGGTAGTCCAAGATTTTTCATTGGACCAGATAGTCAAAATCCATGGGTTGATTCCTCACAGAAACTGTCAGGAAATGATGGGACTGCCATCCCGGAACATCCTTATGCACATGCTCTGAAGTTGAATCCAAAGTCCCTAGGTCAGGAAAATCAACACTCAATTATTGTAGATACCATTCATCCCCCACAAGACATAAATGCTGGAACCTGCTTCGAACCCATGCAGCTGCCAAAACCATCTTTTAATATGGTTCACAATAAAGAGGTTTTAAGAAATGACACTCCTCTGACTGTAGCAGTGAGTTTGCAGTCGAAAAGTTTGCTCAGAGAAGGGGTAGAGAGGGACAAGGTTGAAAACTCTAATGTGCAGAGTATATCTTTTTCAGAGCAAAATAAAATTGCTGAGAATGTATGCGAAGCTGCTGCTCCTGTTGAGTCTAACAATTCAAATTCAAAACCTGCAGCAGAGTGTGGGCATGTTGAGAAATTGGCTGGTGAGGACTGTTCTGCTCCGGAAGATTCTAAGCATTTGGTTCATCAATTCAGCTTCTTGCCTGAGTTGATTGCTTCTGTAAAAAAGGCTGCATTAGAAGTTGCTGAGGAGGTGAAAACTGCAGCTGATGAGCATGCCAGTTCTCAGATACACAATTCAAATACCAAAGAAGAAACAGCAAATGAAGTAGAACCCGTGAATGCTCATGGTGATTTAGAATTGGACTCTGAAATTGACCATGTAGATACTTCTAAAATTGAACCTACAAAGGCTGAGGCAGAAGCAATTGCTAGGGGATTGCAGACTATTAAAAATGATGATTTGGAGGAGATCCGCGAGCTAGGTTCTGGAACTTATGGGGCTGTTTATCATGGGAAATGGAAAGGTTCTGATGTTGCCATAAAGAGAATAAAAGCCAGTTGTTTTGCTGGAAGACCATCTGAAAGAGCAAGATTGATTGCAGATTTCTGGAAGGAGGCATTGATGCTCAGTTCATTACATCATCCAAATGTTGTCTCCTTCTATGGTATTGTTCGTGATGGACCTGATGGTTCTTTAGCAACAGTAACAGAATTCATGGTTAATGGATCTTTAAAACAGTTCTTGCATAAGAAAGATAGAACGATAGATCGTCGTAAGAGGCTCATTATTGCTATGGATGCTGCATTTGGGATGGAGTATTTGCATGGAAAGAACATTGTGCATTTTGATTTGAAGTGTGAGAATCTATTGGTTAATATGAGAGACCCACAACGGCCTGTCTGTAAGATTGGTGACTTGGGTTTATCTAAGGTTAAACAGCATACTCTAGTGTCTGGAGGAGTACGGGGAACTTTGCCATGGATGGCACCTGAACTTCTCAGCGGGAAAAGCAATATGGTGTCCGAGAAGATTGATGTTTACTCATTTGGGATAGTCATGTGGGAGTTACTCACAGGGGATGAACCCTATGCTGAGATGCATTGCGCTTCAATAATAGGAGGAATTGTGAACAACATTTTACGTCCTCAAATCCCAACGTGGTGTGATCCTGAGTGGAAGTCTCTAATGGAAAGTTGTTGGTCTTCTGATCCTGTTGAAAGGCCATCATTTTCAGAAATTTCCAAGAAGCTGAGGAGTATGGCTGCTTCAATGAATTTGAAATAG 3357 0.4361 MCNKGFQCLSESESVIEYRQHLLMDSPTAVRLLATGSGSAPGSGDDSRRVKFLCSFLGSIMPRPQDGKLRYVGGETRIVSVPRDISYDELMGKMRELYEGAAVLKYQQPDEDLDALVSVVNDDDVVNMMEEYDKLGSGDGFTRLRVFLFSQSEQDGSSHFIDGDESERRYVDALNSLNDASDFRRLQQAEFAMVGPVEDIHVADQFFNRLSVDSGIPSQRSGELSMSQYNLHHLTIQHQPSIGQRYSEMDTSWNPAYYSPRHHGHHAEFPSSPSGTRYRVPFPELPDKGIDRVSDEYARHHVNHHPVYDNQPQYSENVVWLPTGAAHGEKSGFPGNILHGPHVLDGNSICEQCRMSFPRGQPAVEHPNVSNGLPLVANPCAECPSNRDSFTVNADAKLHPMIYPNDLNNDHRSIYSDTQNHERGWGLQHQTTARVEESRGHVSGSGRLSDHYVSDIPVINFSPGHDSVTDGHTTSSNYAPQRAAPELGAELFPDQTVAAIPHLQIPPLEEHNVRYGNPSSPYGVDSNYACGHVPGHAFRRNAPTPVHIGPTYETTTPPQQVNGMINAGLIRGEGSPRFFIGPDSQNPWVDSSQKLSGNDGTAIPEHPYAHALKLNPKSLGQENQHSIIVDTIHPPQDINAGTCFEPMQLPKPSFNMVHNKEVLRNDTPLTVAVSLQSKSLLREGVERDKVENSNVQSISFSEQNKIAENVCEAAAPVESNNSNSKPAAECGHVEKLAGEDCSAPEDSKHLVHQFSFLPELIASVKKAALEVAEEVKTAADEHASSQIHNSNTKEETANEVEPVNAHGDLELDSEIDHVDTSKIEPTKAEAEAIARGLQTIKNDDLEEIRELGSGTYGAVYHGKWKGSDVAIKRIKASCFAGRPSERARLIADFWKEALMLSSLHHPNVVSFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPQRPVCKIGDLGLSKVKQHTLVSGGVRGTLPWMAPELLSGKSNMVSEKIDVYSFGIVMWELLTGDEPYAEMHCASIIGGIVNNILRPQIPTWCDPEWKSLMESCWSSDPVERPSFSEISKKLRSMAASMNLK 1118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00115 1118 CDD PB1_UP2 53 149 - -
Gabi4981g00115 1118 SUPERFAMILY CAD & PB1 domains 66 156 - -
Gabi4981g00115 1118 Gene3D Phosphorylase Kinase; domain 1 831 931 - -
Gabi4981g00115 1118 PANTHER SERINE-THREONINE PROTEIN KINASE 116 1111 - -
Gabi4981g00115 1118 MobiDBLite consensus disorder prediction 779 801 - -
Gabi4981g00115 1118 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 838 932 - -
Gabi4981g00115 1118 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 933 1118 - -
Gabi4981g00115 1118 SMART PB1_new 64 149 IPR000270 GO:0005515
Gabi4981g00115 1118 ProSitePatterns Protein kinases ATP-binding region signature. 851 872 IPR017441 GO:0005524
Gabi4981g00115 1118 Pfam Protein tyrosine and serine/threonine kinase 846 1108 IPR001245 GO:0004672|GO:0006468
Gabi4981g00115 1118 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 69 151 - -
Gabi4981g00115 1118 CDD STKc_MAP3K-like 851 1108 - -
Gabi4981g00115 1118 PRINTS Tyrosine kinase catalytic domain signature 1035 1057 IPR001245 GO:0004672|GO:0006468
Gabi4981g00115 1118 PRINTS Tyrosine kinase catalytic domain signature 927 940 IPR001245 GO:0004672|GO:0006468
Gabi4981g00115 1118 PRINTS Tyrosine kinase catalytic domain signature 964 982 IPR001245 GO:0004672|GO:0006468
Gabi4981g00115 1118 PRINTS Tyrosine kinase catalytic domain signature 1079 1101 IPR001245 GO:0004672|GO:0006468
Gabi4981g00115 1118 Pfam PB1 domain 65 149 IPR000270 GO:0005515
Gabi4981g00115 1118 MobiDBLite consensus disorder prediction 782 798 - -
Gabi4981g00115 1118 SUPERFAMILY Protein kinase-like (PK-like) 837 1106 IPR011009 -
Gabi4981g00115 1118 ProSiteProfiles Protein kinase domain profile. 845 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4981g00115 1118 Gene3D Transferase(Phosphotransferase) domain 1 932 1117 - -
Gabi4981g00115 1118 ProSitePatterns Serine/Threonine protein kinases active-site signature. 970 982 IPR008271 GO:0004672|GO:0006468
Gabi4981g00115 1118 Gene3D - 68 152 - -
Gabi4981g00115 1118 SMART serkin_6 845 1112 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00115 Gabi-Chr4981 1284333 1296792 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00115 45 1118 MAP Kinase Kinase Kinase AT5G57610 55.405 0.0 1083
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Gabi4981g00115 PK_Tyr_Ser-Thr 5.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00115 - - gmx:100779077 1837.39