Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00114 ATGGGTAGAGCTCCATGCTGTGACAAGGCCAACGTGAAGAAAGGACCTTGGTCTCCCGAAGAAGATGCTGCACTAAAAGCCTACATTGAAAATAATGGAACTGGAGGCAATTGGATTGCTCTTCCTCAGAAAATTGGGCTCAAGAGATGTGGAAAGAGTTGCAGACTTAGGTGGTTAAATTACTTGAGACCTAATATCAAACATGGTGGGTTTACTGAAGAAGAAGACAACATCATCTGCAACCTTTACATTAGCATTGGCAGCAGGTGGTCCATTATTGCTGCTCAGTTACCTGGAAGGACAGATAATGACATCAAGAACTATTGGAACACTAGATTGAAGAAGAAACTGCTTGGGAGGCGCAAACAATCTAACATCAACCAAAAAGACACAAAAGGAATAGAGGAAAACTCATATTCAAATGGCTTAAGTAGCTCCGCTCTTGAAAGACTCCAACTTCATATGCACCTTCAAAGCCTTCAAAACCCTTTCTCTTTCTACAATAATCCTGCACTGTGGCCAAAATTGCATCCTTTCCAACAAAAGATGATCCAAAGCCTGCAATCTTCAAATGATAGCTCTAACCCTGTGATGCAAAATGCTTTGCCTTTCCCTCATGTTGGGGAAGGACAAAAAGATGAGTTCTATAAACCTCCTAGGAGTGATGTAGTTCAACAAGATGATGCAAAGATCAATAACCCACAGGTTGATCTTTTGGGGAATTCCTTGAACAACAGTTCAGTTCCTTTCATTGCTTCTGGGAATAATCCAATGCATTCAAGTCTTGCACCAAGAGCAGAGGCTGTTGAGAAGACTAATGTGGGACTTCAGCAACTTGGTGCGCTGCAAACTGAACTAGATGAAATTCTAAACAACAGAACAATGGGTTACATACCACAGGAAGATCACATGGCTCAATTTGATTGTTTCAGAGAGATGAATGGTTCAAAGGACAGCTTCATTTGGTGGTCCAATGATTCTGACACCAAATCAGCATCCTCAAACTCCTGGGATTCACCGAATACTCCAGTTATTCTGCCAGAAGGGATGTTCCAAGATTATGAACTAGGTTACACTCTGTAG 1083 0.4164 MGRAPCCDKANVKKGPWSPEEDAALKAYIENNGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFTEEEDNIICNLYISIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLLGRRKQSNINQKDTKGIEENSYSNGLSSSALERLQLHMHLQSLQNPFSFYNNPALWPKLHPFQQKMIQSLQSSNDSSNPVMQNALPFPHVGEGQKDEFYKPPRSDVVQQDDAKINNPQVDLLGNSLNNSSVPFIASGNNPMHSSLAPRAEAVEKTNVGLQQLGALQTELDEILNNRTMGYIPQEDHMAQFDCFREMNGSKDSFIWWSNDSDTKSASSNSWDSPNTPVILPEGMFQDYELGYTL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00114 360 FunFam Transcription factor MYB36 70 139 - -
Gabi4981g00114 360 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Gabi4981g00114 360 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Gabi4981g00114 360 CDD SANT 71 113 IPR001005 -
Gabi4981g00114 360 PANTHER OS09G0431300 PROTEIN 1 340 - -
Gabi4981g00114 360 Gene3D - 7 68 - -
Gabi4981g00114 360 SMART sant 67 115 IPR001005 -
Gabi4981g00114 360 SMART sant 13 64 IPR001005 -
Gabi4981g00114 360 CDD SANT 16 62 IPR001005 -
Gabi4981g00114 360 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Gabi4981g00114 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Gabi4981g00114 360 Gene3D - 70 139 - -
Gabi4981g00114 360 FunFam Transcription factor RAX3 7 68 - -
Gabi4981g00114 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Gabi4981g00114 360 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Gabi4981g00114 360 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00114 Gabi-Chr4981 1276369 1277803 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00114 1 208 MYB Transcription Factor Family AT5G57620 70.833 4.99e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Gabi4981g00114 Myb_DNA-binding 4.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00114 K09422 - gmx:778083 607.446