Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00103 ATGGGGTCTGAAAAAAATATAGGGAAGTATCGGCTTGGAAGGACACTAGGAGAAGGTAAATTCGCTAAGGTTAAGCTAGCTGTGAATTGCAACAATGGTCAGAAAGTTGCGATCAAGGTCATTGATAAGCATATGGTCACGGAAAGCAATCTTAAGCATCAGGTCAAAAGAGAGATTAGAACAATGAAACTTCTGCATCATCCCAATATTGTCAGAATTCACGAGGTTATTGGCACAAAAACAAAGATATACATTGTGATGGAATATGTATCAGGAGGACAACTATTAGACAAGATGTCCTATGCTAAGATGTTGAATGAATGTGAGGCCAGAAAACTATTTCAGCAACTTATTGATGCCGTGGACTACTGCCATAACAAAGGAGTTTATCATCGAGATCTCAAGCCAGAAAACTTGCTTCTTGACAGCAAGGGAAATCTTAAAGTGTCTGATTTTGGATTAAGTGCACTGCAAAAGCCTAATGATGTCTTAAACACGCGATGTGGCTCCCCGTGTTATGTGGCACCTGAGCTACTATTGAGCAAAGGGTACGATGGAGCAGCTGCTGATGTTTGGTCATGTGGGGTGATCCTTTTTGAATTACTTGCAGGCTATCTACCATTTGACGACCAAAACTTGATGCGCTTATATAAGAAGATATGGAAAGCAGAATACACGTGTCCATCATGGTTTACTCAAATTCAAAAGAAACTAATTGCCAGAATACTTGAACCAAGTCCTCTAAAGCGAATGACCATACCAGATATTCTTGAAGATGAGTGGTTTCAAACAGATTATAAGCCTGCTTGTGCATGTGAATTTGATCAGAACATCAACTTGGATGATTATAATGCTACTTTCGATTCAATCGAGGAGAAAATCAGAGAGTCAACGATATCGAAGTCCTCAAGTTTCATTAATGCGTTTCAACTAATAGCCATGTCTCAGGACCTTGATCTATCTGGCCTTTTTGAAGAACAGGATCACAAAAAGAATACAACAAGGCTTGGATCCAAGCACACAATCAATGAAACAATAGAAAAAATAAAAGCTGCTGCAACAGATGTAAGACTGTCAGTAGAGAAAATGAACAACTTTAAGATAAAAATGCACCCTAAACAGATAATGACTAGATGTTCTAGATCATGCTTTGACCTATCAGCCCAGGTGATAGAAGTTGCTCCAACTCATTGTGTTGTAGAAATATCAAAATCTGTTGGAGATCTAAGAATGTACAACGAATTTTGTGAAAGTCTATCAAGTCTTCTGAAACAAAAATCTGCTGTGCCATCACAAAGCCAAGATGCTGAGGATCTATGCGCCACTGGCATAAAAAAGAAAGATGGATGTTATGATGAAGAGCCAAATAGTGAAGATAGTGAAGGTCTTCGTGGCTATAAATCTGCTTGA 1410 0.3872 MGSEKNIGKYRLGRTLGEGKFAKVKLAVNCNNGQKVAIKVIDKHMVTESNLKHQVKREIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVSGGQLLDKMSYAKMLNECEARKLFQQLIDAVDYCHNKGVYHRDLKPENLLLDSKGNLKVSDFGLSALQKPNDVLNTRCGSPCYVAPELLLSKGYDGAAADVWSCGVILFELLAGYLPFDDQNLMRLYKKIWKAEYTCPSWFTQIQKKLIARILEPSPLKRMTIPDILEDEWFQTDYKPACACEFDQNINLDDYNATFDSIEEKIRESTISKSSSFINAFQLIAMSQDLDLSGLFEEQDHKKNTTRLGSKHTINETIEKIKAAATDVRLSVEKMNNFKIKMHPKQIMTRCSRSCFDLSAQVIEVAPTHCVVEISKSVGDLRMYNEFCESLSSLLKQKSAVPSQSQDAEDLCATGIKKKDGCYDEEPNSEDSEGLRGYKSA 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00103 469 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4981g00103 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Gabi4981g00103 469 FunFam Non-specific serine/threonine protein kinase 301 427 - -
Gabi4981g00103 469 CDD CIPK_C 307 425 - -
Gabi4981g00103 469 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4981g00103 469 FunFam Non-specific serine/threonine protein kinase 3 303 - -
Gabi4981g00103 469 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 8 414 - -
Gabi4981g00103 469 SUPERFAMILY Protein kinase-like (PK-like) 7 292 IPR011009 -
Gabi4981g00103 469 FunFam Non-specific serine/threonine protein kinase 1 89 - -
Gabi4981g00103 469 ProSitePatterns Protein kinases ATP-binding region signature. 16 39 IPR017441 GO:0005524
Gabi4981g00103 469 Gene3D Phosphorylase Kinase; domain 1 1 89 - -
Gabi4981g00103 469 Gene3D Transferase(Phosphotransferase) domain 1 90 286 - -
Gabi4981g00103 469 Gene3D Kinase associated domain 1, KA1 302 426 - -
Gabi4981g00103 469 MobiDBLite consensus disorder prediction 447 469 - -
Gabi4981g00103 469 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Gabi4981g00103 469 Pfam NAF domain 304 362 IPR004041 GO:0007165
Gabi4981g00103 469 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00103 Gabi-Chr4981 1197709 1200935 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00103 87 423 CBL-interacting serine-threonine protein kinases AT5G57630 63.235 1.66e-148 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Gabi4981g00103 Pkinase 6.7e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00103 - - gmx:100786097 780.015