Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00077 ATGGAGTGCGCCTCGAAAATTGTAGAAAAAGCAATTGATGTTGTGTGGGACCTGAGTTTCCGGCATCTGGGTTACATCTGGAATTACAGGGAAAATGTTAATGAACTAAAGGAACGTGTAAAGAATCTTGGCCTTGAAAAAGAGAGGGTGAAACATCAAGTTGATGAAGCTGGGAATAATATGAGAGGAATAGAAAGTAAGGTTAGAGTTTGGCTTGAGAAAGTGGACAAAACTATAACTGACATAAACGAGAAGTTTCAGAACAATGAAGACCACACAAAAACGAGGTTTTTCAATTTGCGGAATAGGCACAGACTAGGCAGAAAAGCAAAGAAGATGGCTGCAGATGTTAAGTTACTAATAGATGAGTCCAGGTTTGATGGAGTTTCCTATCAACAGAACCCAACATCCATAGATGCCATTTTGTCTAATGTTGGCTATATGGAATTTGGTTCAAGAAAACATACAATGGAACAAATAATGGAACAACTAGAAGATTCCGCAGTGAGGATGATTGGAGTGTATGGGCCAGGTGGTGTGGGCAAGAGCACTTTAATCAAAGAGATTGCTAAGGAAGCTAAGAAGTTGTTCAGTGTGGTAGCTATAGCAGAGGTAACAGACAATCCCAGACCTCAAAATATCCAGGAAGTTATTGCTTATGTATTAGGATTGACATTGGAAGAGGAAGATGAGACTGTGAGAGCAGATCGTCTGCGAAGGAGGTTAAAGAAAGAGAAGGAGAACACCCTTGTAATCTTGGATGATCTTTGGGATAAATTAGACTTGAATAAGTTAGGGATTCCATTTGATGATGATGACGACGATGACAGTTTAAGCCAGATGACAATCAAAGATAAAAAGGATCTTAACTTCAAAGGGGTGAAAAAGGAAAAATCTCTTGGTGATTATAAAGGGTGCAAAATTTTGCTAACTTCAAGAGATAAAAAAGTATTGTCTGAGAAAATGGATGTTAAGTTAACATCCATTTTCTGCGTAAGGGAATTAGATGAGAAGGATGCTCTGGTGTTGTTTAAGAAGGTGGCTGGGATATCTGATGAAATGTCTAGTTTTAAACAAGAAATTGTGAAGAAATACTGTGCAGGGTTGCCCATGGCAATAGTTACAGTTGGAAGGGCATTAAGAAATAAGAGTGAGTCAGTGTGGGCAACTACACTAGAAAAACTTAAAAAGCAAGAACTGATGGGAGTGCAGAAATCTATGGAGATTTCGGTAAAGATAAGTTATGACCATCTAGAAAGTGAGGAGCTCAAATCCATTTTCTTACTTTGTGCTCAAATGGGTCATCAACCATTGATTATGGACTTGGTGAAGTATTGTTTTGGTTTGGGCATACTTCAAGGGGTCTATGCGCTAAGGGAAGCTCGGGATAGAATATATGCATCTATCCAAAAGCTAAAAGACTCAAGTTTGCTGTTGGACGGAAGTTCTAGTGATAATTTCAAAATGCATGATATGGTTCAAGATGCTGCTTTATCTATAGCACACAAGGAGCAAAATGTATTTACTTTGAGAAATGGGAAAGTAGATGACTGGCCAGACGAGGATGAACTCGAGAGGTGCACTGCTATTTCTATACACGATAGTGATATCATTGAGCTTCCTAAAGTTATAAATTTTCCTCAACTTAAATTCTTCCAAATTGCCAGTGATGATCCATCTTTGAAAATACCTGAGAATTTTTTTGAAGGAATGAAAAAACTCAGAGTATTAATATTGAATGGTATTCATCTACCATGCTTGCCATCTTCCATCAAATCCCTATTAAACCTCACAATGCTTTGTTTGGAGCGATGCACTCTAGTTCACAACTTATCCATCATAGGAGAGCTCAAAAAATTAAGAATTCTCAGCTTTTCTGGATCTCAAATCCAAAAATTGCCAGCTGAGCTAGAGTGCTTAGTTAAGCTACAATTGTTAGACATCAGCCAATGTTCCATAGGGAAGGGGATTCCACCGAATATTATGTCAAGCTTGAAGTGTTTAGAAGAGTTGTATATAAGAAAGAGCTTGATGAAAATTGAGGAGGAAGGAGAGACAAACCAAAGTCATAAGTCATTTCTTTCTGAGCTAGAGCATCTGCATCAATTGAAAATTGTGGACTTATGCATCCCTAGTGCTGTAGTTTTACCTCGGAACTTGCTCTTTGACAAGTTAGATGATTACAAGATCCTGATTGGAGACTTCAAGATGCTTTCAGTTGGAGATTTCAGGATGCCCAATAAGTATGAAGCATTAAGATCTTTGGCATTGCAGCTGAAAGATGACACTCAAATTCATTCCCAGATAGGGATAAAATTGTTGTTTGGAAGAGTTGAAAACTTGTTGTTGGGAGAGCTAAATGGTGTTAAGAATGTGTTTTATGAGTTGAATTTGGATGGATTTCCATATCTGAAACACTTGTCGATCATTAATAACGGGGATATTGAATATATCATTAAATCAATGGAGCTGTCCCAGCCTCAGGATGCTTTTCCCAATTTGGAATCTCTATGTCTCTACAAACTGAGTGAAATAAAGATGATATGTTGCAGTCCAGTTACAGATGCGTCATTCTCCAAATTAAAAACCATAAAGGTCAAGATGTGTACCCATTTGAAGAATCTCTTCTCCTTTTACATGGTGAAATTTCTTGCTAGTTTAGAAACAATTGATGTTTCTGAATCTGATTCTTTGGAGGAGATTGTTATTGAGGAAAGACAAGTAAATTCTGAGAAGGTTGAGTTTCATAAGTTACGGTCCTTGAAACTACAATCCTTACCGTTATTTACTAGTTTTTATACTAAGGTTGAGAAGCCTTCTGCACCTCAATTGATACAAGGGCAAACAACAAACAGGGATCACACTGAAATCACTATTGCAGAGGATGAGCATTATCTCTTTAGTGAAATGGTTGAAGTTCCCAACTTAGAGAGGTTGAAGTTATCCTCGATCAAGATCCATAAGATATGGAGAGACCAGCCTTTGTCAAGTTCCAGCTTTCAAAATTTAATAAAATTAACTGTTGAAGGTTGTCATAACTTGGAATATTTATGTTCATTGTCTGTGGCTAGCCGTTTGGAGAAACTGAAAGGCCTTTTTATTAGTGACTGTCGGATGATGAAGAAGATTTTTAGCATTGATGGAAATAGTGAGGACAAGGTCTGCATTTTTCCTAAGTTGGAGGAAATCCGCCTCACCGAAATGAATATGTTAACAGACATTTGGCAAGCTGAAGTCATTGGTGCTGATTCCTTTTCTAGTCTCATTTCTGTGCACATTGTAAGGTGCAGAAAACTAGACAAGATATTTCCGAGTCACATGAAAGGATGGTTTAGGACATTAAACATCTTGAAGGTTGTTAATTGCAAGTCAGTGGAAGTGATTTTTGAAGGAATTCTTAACTTCAAAAATCTGCGAAGTATAGGCGTTTTTGATTGTGATAAACTTAGCAGTGTTTTACCAGCTTCTGTGGCCAAAGATCTTGAAAAGCTTGAATACCTTTTGGTAATGTTTTGTGATGGAATAATGGAAATTGTTGCCGGGGAAGATGGCTCAGAAACTAGCAATGAACCATTAGTGTTTCCTGAAGTAACTCGGATCACATTATGTTACCTAGAAAAAATTAAGCGTTTCTATATGGGGAGACATACTATAGAGTGTCCAAAATTGAAGCAGTTGACAGTGGTATCTTGTGATATGCTGCAAACATTCACAACAGAAACCACAAATGAAGAAGGAAATGCAGTTTTCTCAGCTGAAAAGGTAAGAAATCATTAA 3777 0.3754 MECASKIVEKAIDVVWDLSFRHLGYIWNYRENVNELKERVKNLGLEKERVKHQVDEAGNNMRGIESKVRVWLEKVDKTITDINEKFQNNEDHTKTRFFNLRNRHRLGRKAKKMAADVKLLIDESRFDGVSYQQNPTSIDAILSNVGYMEFGSRKHTMEQIMEQLEDSAVRMIGVYGPGGVGKSTLIKEIAKEAKKLFSVVAIAEVTDNPRPQNIQEVIAYVLGLTLEEEDETVRADRLRRRLKKEKENTLVILDDLWDKLDLNKLGIPFDDDDDDDSLSQMTIKDKKDLNFKGVKKEKSLGDYKGCKILLTSRDKKVLSEKMDVKLTSIFCVRELDEKDALVLFKKVAGISDEMSSFKQEIVKKYCAGLPMAIVTVGRALRNKSESVWATTLEKLKKQELMGVQKSMEISVKISYDHLESEELKSIFLLCAQMGHQPLIMDLVKYCFGLGILQGVYALREARDRIYASIQKLKDSSLLLDGSSSDNFKMHDMVQDAALSIAHKEQNVFTLRNGKVDDWPDEDELERCTAISIHDSDIIELPKVINFPQLKFFQIASDDPSLKIPENFFEGMKKLRVLILNGIHLPCLPSSIKSLLNLTMLCLERCTLVHNLSIIGELKKLRILSFSGSQIQKLPAELECLVKLQLLDISQCSIGKGIPPNIMSSLKCLEELYIRKSLMKIEEEGETNQSHKSFLSELEHLHQLKIVDLCIPSAVVLPRNLLFDKLDDYKILIGDFKMLSVGDFRMPNKYEALRSLALQLKDDTQIHSQIGIKLLFGRVENLLLGELNGVKNVFYELNLDGFPYLKHLSIINNGDIEYIIKSMELSQPQDAFPNLESLCLYKLSEIKMICCSPVTDASFSKLKTIKVKMCTHLKNLFSFYMVKFLASLETIDVSESDSLEEIVIEERQVNSEKVEFHKLRSLKLQSLPLFTSFYTKVEKPSAPQLIQGQTTNRDHTEITIAEDEHYLFSEMVEVPNLERLKLSSIKIHKIWRDQPLSSSSFQNLIKLTVEGCHNLEYLCSLSVASRLEKLKGLFISDCRMMKKIFSIDGNSEDKVCIFPKLEEIRLTEMNMLTDIWQAEVIGADSFSSLISVHIVRCRKLDKIFPSHMKGWFRTLNILKVVNCKSVEVIFEGILNFKNLRSIGVFDCDKLSSVLPASVAKDLEKLEYLLVMFCDGIMEIVAGEDGSETSNEPLVFPEVTRITLCYLEKIKRFYMGRHTIECPKLKQLTVVSCDMLQTFTTETTNEEGNAVFSAEKVRNH 1258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00077 1258 Gene3D Ribonuclease Inhibitor 787 939 IPR032675 -
Gabi4981g00077 1258 Gene3D - 145 326 IPR027417 -
Gabi4981g00077 1258 PRINTS Disease resistance protein signature 882 898 - -
Gabi4981g00077 1258 PRINTS Disease resistance protein signature 171 186 - -
Gabi4981g00077 1258 PRINTS Disease resistance protein signature 243 257 - -
Gabi4981g00077 1258 PRINTS Disease resistance protein signature 366 380 - -
Gabi4981g00077 1258 Pfam NB-ARC domain 154 273 IPR002182 GO:0043531
Gabi4981g00077 1258 Pfam NB-ARC domain 304 416 IPR002182 GO:0043531
Gabi4981g00077 1258 SUPERFAMILY L domain-like 486 1126 - -
Gabi4981g00077 1258 Coils Coil 26 67 - -
Gabi4981g00077 1258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 141 430 IPR027417 -
Gabi4981g00077 1258 Gene3D Ribonuclease Inhibitor 483 726 IPR032675 -
Gabi4981g00077 1258 Coils Coil 228 248 - -
Gabi4981g00077 1258 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1114 1238 - -
Gabi4981g00077 1258 Gene3D Ribonuclease Inhibitor 940 1240 IPR032675 -
Gabi4981g00077 1258 SMART AAA_5 168 339 IPR003593 GO:0016887
Gabi4981g00077 1258 Gene3D - 334 419 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00077 Gabi-Chr4981 857947 862030 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00077 169 661 WRKY Transcription Factor Family AT5G45050 25.355 3.24e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00077 - - psat:127076002 1690.63