Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00048 ATGGGAAATAGTGAGGAAGGGAAATCCATTAAGAATGAAAAGCCTTCTTCACCTGTTATAACTGATCAGACCAACCTGCCAAATGTTCATGTCTATCCTGATTGGGCCGCCATGCAGGCATATTATGGGTCAAGAGTCAACATTCCACCATACTACAACTCAGCTCTGGCTTCGGGTCATGCTCCTCACCCATACATGTGGGGGCCACCACAGCCTATGATGCCACCTTATGGGCCGCCTTATGCAGCATTTTATTCACATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATTCACATGGTCAAGGAGTTCCATCTTCACCTGCTGCTGGGACTCCTTCAAGCATAGAGACACCAACCAAATTATCTGGAAATACTGATCAGGGTTTAGTGAAGAAATTGAAAGGGATTGACGGGCTTGCTATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGTGGAGCTGAAAACAGGCTGTCACAGAGTGTGGATACTGAAGGTTCCAGCGATGGAAGTGATGGCAATACTGCAAGGGCTAATCAAACAAGAAGAAAAAGAAGAAGTGAGAGAACCCCAACCACTGATGGAGAAGGGAAAACTGAGATACAAGATAGTCTGGTTTTGAAAGAGACTACAACTTCCAAAAAGATGATGCCAGTTACCCTAGCCAGTGTTGCTGGAAAAGTAGTTGAATCTGTAGTTTCTTCAGGAATGACCACGTCACTGGAGCTGAGGAACCCTTTGACTGTTCATTCTAAGACAAGTTCCTCAAGTGGCACACAACCTAGTGGAGTTTTGCCTTCTGAAGTTTGGTTACAGACTGAGCGTGAACAGAAACGTGAGAGGAGGAAACAATCAAACCGCGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAGACTGAAGAATTGGCACGAAAAGTTGATTCCTTGGCTGCTGAATATACGTCGCTGAAATCAGAAATAAATCAATTAACTGAAAGTTCTGAGAAGCTGAGGATGGAAAATGCTACATTAAGGGAAAAACTGGAAAATACTCAACTGGGACAAATGGAAGAGATAATCTTGAACAGTATTGACAGCAAGAGGGCTACACCTGTAAGTACAGAAAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACCGCAGAGGATAATGATTTCTGTGAGAAAAAACCAAATTCTGGTGCAAAGCTGCATCAACTATTGGATACAAATCCTAGAGCTGATGCTGTGGCAGCTGGTTGA 1272 0.441 MGNSEEGKSIKNEKPSSPVITDQTNLPNVHVYPDWAAMQAYYGSRVNIPPYYNSALASGHAPHPYMWGPPQPMMPPYGPPYAAFYSHGGVYTHPAVAIGPHSHGQGVPSSPAAGTPSSIETPTKLSGNTDQGLVKKLKGIDGLAMSIGNCNAESAERGAENRLSQSVDTEGSSDGSDGNTARANQTRRKRRSERTPTTDGEGKTEIQDSLVLKETTTSKKMMPVTLASVAGKVVESVVSSGMTTSLELRNPLTVHSKTSSSSGTQPSGVLPSEVWLQTEREQKRERRKQSNRESARRSRLRKQAETEELARKVDSLAAEYTSLKSEINQLTESSEKLRMENATLREKLENTQLGQMEEIILNSIDSKRATPVSTENLLSRVNNSSSNDRTAEDNDFCEKKPNSGAKLHQLLDTNPRADAVAAG 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00048 423 FunFam G-box binding factor 3 282 337 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 155 214 - -
Gabi4981g00048 423 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 281 344 IPR004827 GO:0003700|GO:0006355
Gabi4981g00048 423 Pfam Disordered region downstream of MFMR 130 259 - -
Gabi4981g00048 423 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Gabi4981g00048 423 SMART brlzneu 279 343 IPR004827 GO:0003700|GO:0006355
Gabi4981g00048 423 SUPERFAMILY Leucine zipper domain 283 338 IPR046347 GO:0003700|GO:0006355
Gabi4981g00048 423 Gene3D - 281 356 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 158 182 - -
Gabi4981g00048 423 CDD bZIP_plant_GBF1 284 332 IPR045314 GO:0003700|GO:0006355
Gabi4981g00048 423 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 391 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gabi4981g00048 423 Coils Coil 306 347 - -
Gabi4981g00048 423 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 286 301 IPR004827 GO:0003700|GO:0006355
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 183 201 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 108 130 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 251 272 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 277 309 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 379 423 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 101 130 - -
Gabi4981g00048 423 Pfam bZIP transcription factor 279 341 IPR004827 GO:0003700|GO:0006355
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 251 309 - -
Gabi4981g00048 423 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00048 Gabi-Chr4981 558167 563412 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00048 1 423 bZIP Transcription Factor Family AT2G46270 51.044 1.71e-108 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gabi4981g00048 MFMR_assoc 1.8e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00048 K09060 - gmx:547789 607.446