Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00025 ATGTTGTGCAGCTTCTCCACCATTACCCTTACCTTCACCTTAACCTTGTTCCTTCTCTTTGCACCTCTTCATTCTTCACAACCCATCATCATCATCCACCGTAGGATCCTCCATCAACCATTTCTTCCATCTCAACCTCCAAACCCTTCACCACACTCTTCTTCTTCTTCTTCTCCTCCACCTTCAAACCCCAAGTACCCTTTTTCTTCCATAACCCCCACCACAAACAACACCACTACCCCTAATGATTCTTCTACACCCTTTTTCCCTACATACCCATCACCACCACCACCTCCTTCTCCTTCAACCTTCGCTTCCTTCCCTGCTAACATTTCTTCTCTTATACTCCCTCAACCCCCCAAATCCAAATCATCTTCTACTAAGCTAGTCGCCGTCGCCATTTCCGCCGTCGCTTGCGCCGTCGTCGTCGTCGCCGTCTCTTCCTTCGTCTACTGCCGACGCAGGCGTAAAGGCTACTCCGCCGACGAGAAAACACTCAGATCCGACAGTAGCATTCGCTTGTTCCCCCGTGAAGCTGCTTCCGGCGCCGGAAACAGAAAGTCGGCGAGGCAGAACTCTTCCACGAGCTCTGAGTTTCTCTACCTTGGCACCATTGTTAACTCACGCGGTGGAGTTGATGATCTTCCTGATTCTCGCGGCGGTGGTAGTGGCGGCGGTGGTGGAGGTTTGAATCCTCGGAAAATGGACTCGCCGGAGCTTCAGCCGCTTCCTCCGTTGGCACGGCAAGCTTCGAGGCTACGCGATGATTCAACCACCGTGACGGTGGAGGATGAAGAAGAGGAATTCTACTCGCCGAGAGGGTCTCTTGGTGGCCGCGAAAGCTCCACCGGAACCGGATCGGGTTCCCGGCGAGTTTTCTCCGCCATTGCCGCCGATAATCTTGTCGGTCGTAGCAGCACTGAATCAAGCTCAACTTCTTTCTCTTCTTCCACTTCTGCTTCACCGGATCGGTCTCATTCCATTAGCCTCTCGCCGCCGGTGAGCATAAGCCCCAGAAGATCACAACCCAAGTCGCCGGAAAATGTACTAACCCACATTTCTACTCCTCCTCCGCCGCCGCCGCCACCACAACCACTCGCCGGAGGCGACGGTAGAAGCTCATTATCGTCATCCACACTATCGTCACCGCTAGTTTACCAACAACACGTGCAATCAAAATCTTCTTCAATGTCTTCAACTCCAGAGCGAGCCTTCGCCGGAGAGTGTCAGTCACCGTCGCTGTCACCGCTCACACTGTCACGGAACGAAAACCAAAACACAGATGGGTCGAGTGTTTTACCTGAAAAGACTCAGTCTTGTGGTTCATCGCCTAAGAAAAACGAAGTTGCATCATCGCCGAGACTATCCAATGCTTCAAGTGGTGGCAAGTCTGTGTCTTCTTTGTCTTCAGGGTTTTCTCTACCGTCACCTGAGAAAGTGGCAATGATGCATCACGGTTTGGATCAGTCTCCGACTATATCTGATGTCTCAGATCGGTATAGGCATTCTCCTCTTTCATCTTTGCCTTTGTCACCAACCTTGCTTTCATCACCTGAGAGAGAATTGAACACTCAATCAGCACCACCTTCTCGGAAGCAATGGGAGATTCCAGACCTCTTAACACCCATTGGTGAATCACCAATGAATGTTGAAACTGTTTTGCTTCAAAATGGGGTACCTCCAGCTCCTCCTACCTTGCCACAGAGGAAACATTGGGAAATTCCGGTTCTTTCAACACCAATTGCTCAATCTCCTAGAGTTTCAACTCCTCCTCCTCCTCCACCACCACCGCCTCCTCCGCCGTTGAATGTGCCGCTGCGGCAGCGGAAGCAGTGGGAAGTGCCTTCTCCCTCTACACCTGTTGATCAACCCATTTCGAGGCCACCGGAGCTTACCCCTCCTTCTAGGCCTTTTGTGTTGCAAACTCCAACAACAAAGGTTTCTCCTGTTGAGTTGCCACCAAGTTCTCAGAATTTGGGGGTGATTGAGGAGAACTCTGAGGAGGCATCAAAACCCAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCCAGCTCTGATCGTGAGATGGTGTGGGATCAGTTGAGGTCTAGCTCTTTTAAGTTGAATGAGGAAATGATTGAAACGTTGTTTGTAGTGAACACACCAAACCCCAAACCTAAGGATACCACTCCACGCTCAAATCTTGCCCCGCAAAATCAGGAGGATAGGGTGCTGGATCCTAAAAAGTCCCAAAATATTGCTATCTTGCTAAGAGCGCTTAACGTGACTATAGATGAAGTGTGTGATGCACTGTTAGAAGGTATTACTGATACACTTGGAACAGAACTACTAGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGTAAATTAAAGGAACATAAAGACGACTCTCCAACCAAGCTTGGTCCTGCTGAGAAATTTTTGAAGGCAGTGCTTGATGTACCTTTCGCCTTCAAAAGGGTGGAAGCAATGCTTTACATAGCCAATTTTGAGTCGGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTCTGGAGGTGGGTTGCGAAGAGCTGCGAAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCTGTTCTTAAGACTGGGAACCGCATGAACGTGGGGACAAACCGCGGTGATGCTCATGCATTCAAGCTTGATACACTTCTCAAGCTGGTTGATGTCAAAGCAGCAGATGGGAAAACCACCTTACTGCATTTTGTTGTACAAGAAATTATTCGAACTGAAGGTGCTCGTCTCTCAGGTAGTAATCAAACTCCAAGCACGACTACGAGTGAAGATGCCAAGTGCAGGAGGCTTGGCTTGCAAGTAGTATCTAGTCTAAGTTCAGATCTAGCAAATGTGAAGAAGGCTGCCGCTATGGATTCTGAAGTTCTCAGCAGTGAAGTGTCTAAACTATCCAAAGGAATTGCACACATTGCAGAGGTTGTGAAGTTAAATCAAATGGCAGGATCAGATGAAAGCAGTCAGAAATTTACAGAATCAATGAACAAATTCATGAGAATGGCTGAGGAGGAGATTCTAAAAATTCAAGCCCAAGAAAGTGTTGCTTTATCCCTAGTGAAGGAGATTACAGAGTATTTCCATGGGAACTTGTCCAAGGAAGAAGCTCATCCATTTAGAATCTTCATGGTAGTAAGAGACTTCTTAACAGTTCTTGACAGGGTCTGCAAAGAAGTTGGTATGATAAATGAGAGAACCATGGTTAGTTCTGCTCATAGATTCCCTGTTCCAATTAACCCCATGCTTCCACAACCCCTTCCTGGTCTACACGGAAAGCGACATTACAGCTCCTCAGATGATGATAGTCCATCTCCTTAG 3351 0.4813 MLCSFSTITLTFTLTLFLLFAPLHSSQPIIIIHRRILHQPFLPSQPPNPSPHSSSSSSPPPSNPKYPFSSITPTTNNTTTPNDSSTPFFPTYPSPPPPPSPSTFASFPANISSLILPQPPKSKSSSTKLVAVAISAVACAVVVVAVSSFVYCRRRRKGYSADEKTLRSDSSIRLFPREAASGAGNRKSARQNSSTSSEFLYLGTIVNSRGGVDDLPDSRGGGSGGGGGGLNPRKMDSPELQPLPPLARQASRLRDDSTTVTVEDEEEEFYSPRGSLGGRESSTGTGSGSRRVFSAIAADNLVGRSSTESSSTSFSSSTSASPDRSHSISLSPPVSISPRRSQPKSPENVLTHISTPPPPPPPPQPLAGGDGRSSLSSSTLSSPLVYQQHVQSKSSSMSSTPERAFAGECQSPSLSPLTLSRNENQNTDGSSVLPEKTQSCGSSPKKNEVASSPRLSNASSGGKSVSSLSSGFSLPSPEKVAMMHHGLDQSPTISDVSDRYRHSPLSSLPLSPTLLSSPERELNTQSAPPSRKQWEIPDLLTPIGESPMNVETVLLQNGVPPAPPTLPQRKHWEIPVLSTPIAQSPRVSTPPPPPPPPPPPPLNVPLRQRKQWEVPSPSTPVDQPISRPPELTPPSRPFVLQTPTTKVSPVELPPSSQNLGVIEENSEEASKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDTTPRSNLAPQNQEDRVLDPKKSQNIAILLRALNVTIDEVCDALLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEVGCEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKAADGKTTLLHFVVQEIIRTEGARLSGSNQTPSTTTSEDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLSSEVSKLSKGIAHIAEVVKLNQMAGSDESSQKFTESMNKFMRMAEEEILKIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFMVVRDFLTVLDRVCKEVGMINERTMVSSAHRFPVPINPMLPQPLPGLHGKRHYSSSDDDSPSP 1116
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00025 1116 SMART it6_source 664 1078 IPR015425 -
Gabi4981g00025 1116 Gene3D Formin, FH2 domain 658 1072 IPR042201 -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 42 103 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 370 474 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 714 738 - -
Gabi4981g00025 1116 SUPERFAMILY Formin homology 2 domain (FH2 domain) 591 1075 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 716 734 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 300 351 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 88 103 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 621 636 - -
Gabi4981g00025 1116 PANTHER FORMIN-RELATED 407 1110 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gabi4981g00025 1116 Pfam Formin Homology 2 Domain 666 1063 IPR015425 -
Gabi4981g00025 1116 ProSiteProfiles Formin homology-2 (FH2) domain profile. 664 1089 IPR015425 -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 585 605 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 575 636 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 490 531 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 276 290 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 42 67 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 1093 1116 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 68 87 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 352 367 - -
Gabi4981g00025 1116 MobiDBLite consensus disorder prediction 211 535 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4981g00025 Gabi-Chr4981 368211 372950 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00025 34 336 FH2 protein (formin) Gene Family AT2G43800 29.032 4.64e-14 75.1