Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00019 ATGGCTTCTTCCTCATCTTTTGGTGCTTCTCAACCAAAGCGTGATGTTTTTCTCAGCTTTAGAGGGGAAGATACTCGTTGCACTTTTACATGCCATCTCTATACTGCCTTGTGTCGACGTAAAATCGCTACTTTCATTGATGATGAGGAAATTGAGAGAGGGGATGAACTATCACCAACACTTTTTTCAGCAATAGAAAGCTCAAAGATTTCCATAACAATTTTCTCAGAGAATTATGCTTATTCTACATGGTGTTTGGATGAACTCGAGAGAATCATTGAATGCAAGGAGAAAAAAGGACTTGTTGTAATACCTGTTTTTTATCGCATCGATCCATCAGATGTAAGACACCAGAGGGGAACTTATGAAGTTGCATTTACAAAACATGAGAAAGATTTTAGTAACAATCTAATCAAGGTACAGAAGTGGAGAACTGCCCTGCGTGAAGCAGCCAACTCAGCAGGATGGGATTCCTCAAATATTAGGTTGGAGTCTGAACTGGTTGAAATGGTTGTTGGAGATGTATTACAAAAATTGAATCGTATGAGCTCACATGTTCCAAATGGGCTCGTTGGAGTTACTGCACATGTTGCACATGTGGAATTATTGTTATGCAAAGGGTCCTCTGGCGTACGAATTATTGGAATTTGGGGCATGGGTGGTATAGGTAAGACAACCGTTGCAGAAGCTCTATATGCAAAACTCTCTTCTCAATATGAGGGATGCTACTTTGTTGCCGACGTGAGAGAAGAATGGAAAAATCATAGAGAAAATGATTTACGGAGTAAACTTCTGAGGGGGGTGTTAGGGGACCCAAATTTGTGTATTACCACTCCTAGTATGACGTCCACTTTCGTTATAGAAAGGCTCCAACGTAAAAAGCTCCTCATCATTCTTGATGACGTGAGTGATTCAAAACAAATAAAATATCTTGTTGGAGAGAAAGATTGGTTTGGACCTGGTAGTAGAATCATAGTGACGACTAGAAACAAAGATGTGTTTAACCGAGGAGTTGATGGAGTATACCACATGATGGAGTTGAATTTTCATGAAGCGTTAAAGCTTTTTAGCCTGAATGCCTTTCAACAAGACCATCCAACGTTGGAATATACACACTTGTCAGAACGGGTTGTAAATTATGCTAAGGGCATTCCGTTAGCTCTAAAAGTTCTGGGTTCATCACTTCATTCCAAACAACCAAGAGAATGGGAAAATGTGTTGGATAAACTCAAGAAAATCCCCCTAGCAGAAATTTATGATGTGCTACGATTGAGTTATGAAGGGTTAGACCCCGAAGAGCAGAATATATTTTTAGATATTGCATGTTGTTTCAAAGGAGAGACAAGAGGCCATATAACAAGTCTATTAGATGGCTGTGGCTTTTCTACAGATGTTGGGATTAGATGCCTTCAAGATAAATCTCTTATAAATGTTTCTAAGGACAACAAGGTACTGATGCATGATTTGATACAAGAAATGGGTTGGCAAATCGTCCGTGAAAAATTTATGAATGAGCCTGGAAAACGAAGTCGATTGTGGGATCCTAAAGAAATTTTTGATGTCCTCAATTATAACATGGGTACTGACTCTATTGAAAGCATAGTGTTGGACATGTCTCAAATCAAAGATGTGACAATAAACCCTAAAACTTTTCTCGGAATGTACAAGCTAAGGCTTCTGAAGTTTTATATGCCCCCTTGGGATAAGAGAAGCAAAGTGTATATTTCCAGAGGTCTTGAATGTATGCCTGATAAAATAACTTATCTCCGATGGGACTATTTTCCATTGAAATCCTTGCCACCATCGTTTTGTGCAGAGAAGCTTGTTGAACTTGATCTAAGACATAGCCTCATTGAAAAACTTTGGGACGGAAAGCAGGATCTTTCGAATTTGAAGTCATTATACCTTAGTGATTGCAAGCATCTGATTGAGCTCCCAGATTTATCTCTGTCTTCAAAACTTGAAGAAGTACATCTCGATGGTTGTTCAAGTTTGATGAAAGTTCCTTCATCCATTTTGTCACTTGATAGTCTGTTTCAACTAAATCTGAGAGGCTGTAAACAACTTCGCTACATTCAAAGTGAGAAGCAATCTAGATCTCTTCAATGGCTTAATCTCAGTGGGTGCTCGAGACTTGAAAAATTTTCAGTGTCTTCAGAGAAATTGAAATACCTGATCTTAAATGCAACAGCAATTAAAAATTTACCTCCAACATTTGACACGTCATTGTCAATCACAAAACTCTTCCTGGATAATTGTTCAAAGTTATCAAAACTCCCTGGCAACCTTGGCCTCTTATCAACATTAAATAAACTTTCATTGAGAGGAAGCAACATTGAGAACTTGCCTGATAGCATAAAAAATCTTTCTCAGTTGAGAGCTCTCAATGTAAGCAATTGCAGGAGGCTTCGTTCCTTGCCAGAGCTTCCATTCTTTTTACAGGACTTGAATGCAAGTAATTGTGTTTCCCTAGAAACAGTATCAAATTTAGGGATCACACTGGTGCAAGATTCTTTTGATAGGCTGAAGAAGAGATCGTTGCTCAGACAGATTCAAGAAGAAGAAAAAATGTCTATTCGTCATCGTAAATATTTGGGGAGGTTCGAGTTTTACAATTGCATAAAGTTGGACCAGATTGCACGCAAGACTGTTATGGAAGAGGCACTAATTAGAATTAAGCTCGCAGCCTACCTGTCATCAAAGATTGAAAAAATTTGTGATCCTTATTTTCAAACTGATGACCCTGAAGATTTTATATATGTTTCCCTTCCGGTTTATATTATTCTACCGGGAAGTGAAGTGCCAAACTGGTTCATACATAAAATAACAGACTCCTCAACTGTAAAACTTTTTGCACGGTGGTATCATTGTTGCAGTGACATGGGCTTTGCTTTCTACCTTGTTCTAGGACCAATGCACTCAAACGGGGAGAAAAATCATCATATTCGGTTTGAAGCAGGGTGTAGATACTATTTTGACGACAAATATGTTGGAACTTGCATGATAAATTCTTCTTGCAATAACGCTGAATCGGATCAGGTATGGCTTTGGTATGACAAATTAAAAGTTGTAGAGGGAACAAGCGATGAAAATCCTCAGCAGGTCTCCTTTGAATTTTTTGTTCTGCCTCAAAGTTCAGGACTTGTCGTGAAACAGTGTGGAGTTCGACCATTGTATGCTGCAGATGTCATCATGCGAAGCTCAAATGAACAAGAAGGTAACAGAGAAGATAAGAGACCTTACATTGAGTCTGAAACCTCTGGAATTGAAAGTAAGTATCAGTTTTCACGGCAGTATGATCTTCCTCTATCAGGATCAGAGAGACAGAGAATTCCTGGGTATCGCAGTGGACAAAGTGGGATATCCTTTTCATCAGTTTATCCTGCCAATGTTTCTCAACTTATAATGAAACACGACCGTTTTCGTTATGGAGATGTAGTCTGTGTTGGTTTTAACATTTATGATGACCACCACCATCGTGCTGCTCTACGGTGTTTAGCACAAATGCTTCTGGATGACTATTGTTATTTAGGTAAACTCACAGACAATATCAACATCTTATCATCGATTGTATGTTTGTCAATATATCGTTGCAATGTTGAGAGCTTGCCTGCAAGCATCGAGCATCTTTCATGGCTGAAACATATTTCACTACGTGAGTGCAAGAGGCTTAGGTCTCTACCAAAGCTTCCATTATCACTTCAATTTTTGGTTGCCGATAATTGCCCATCTCTGGAGACAGTTGAGTTTGCTCAGGCGAAAAAGCTGACTTTTTTTGGAAATTCATACGAAGTGAAGAAAATTTCTGGAAATTTGATATATGAAAAAGTATCAAAGATTGAACTTATTGACCCAGAAACAAGAGTTACCAATTGGACACTGTTAACGTCATCATATGATTCCATATTTGTTGGATTCAATGTTGCTTCACATATTGAGCTATGGAATGTAAATTGGTTATCATGTGAACAATTTCGGCTTCAAGACTGGGAGACTGAAAATGCTACTCTTTTGCATGCTGGGCGATTATTACACCAATTCAGTGCTGATGGATATACCTTGATTGAATCACCAACATTTGCTATGTACGGGGTACAGGCTGATGCAGTGCTTCTAGCTTTACAGGCTAGATTGAAGAGTGTTATAACATTGAAGGGAAAAGTAGATGAGAAAGAAGAAGAAGCAAAAGCAAAGTCCATGTGGGATTGTGGAAGCCCATTATATGACTCGTATGAATTGGTGTCCCTTGATCATCTTATTGATAGGCATCTAATGACACTCCCATCTCTGCATGGATCATATGCTCTCTGTGATAGCACAGAAAGTTGTGTCGACAAGCTCAAAAGTTGTGGGGCCGAAGTTTTGACTTTTGCAGCAATGTTTTGA 4386 0.3881 MASSSSFGASQPKRDVFLSFRGEDTRCTFTCHLYTALCRRKIATFIDDEEIERGDELSPTLFSAIESSKISITIFSENYAYSTWCLDELERIIECKEKKGLVVIPVFYRIDPSDVRHQRGTYEVAFTKHEKDFSNNLIKVQKWRTALREAANSAGWDSSNIRLESELVEMVVGDVLQKLNRMSSHVPNGLVGVTAHVAHVELLLCKGSSGVRIIGIWGMGGIGKTTVAEALYAKLSSQYEGCYFVADVREEWKNHRENDLRSKLLRGVLGDPNLCITTPSMTSTFVIERLQRKKLLIILDDVSDSKQIKYLVGEKDWFGPGSRIIVTTRNKDVFNRGVDGVYHMMELNFHEALKLFSLNAFQQDHPTLEYTHLSERVVNYAKGIPLALKVLGSSLHSKQPREWENVLDKLKKIPLAEIYDVLRLSYEGLDPEEQNIFLDIACCFKGETRGHITSLLDGCGFSTDVGIRCLQDKSLINVSKDNKVLMHDLIQEMGWQIVREKFMNEPGKRSRLWDPKEIFDVLNYNMGTDSIESIVLDMSQIKDVTINPKTFLGMYKLRLLKFYMPPWDKRSKVYISRGLECMPDKITYLRWDYFPLKSLPPSFCAEKLVELDLRHSLIEKLWDGKQDLSNLKSLYLSDCKHLIELPDLSLSSKLEEVHLDGCSSLMKVPSSILSLDSLFQLNLRGCKQLRYIQSEKQSRSLQWLNLSGCSRLEKFSVSSEKLKYLILNATAIKNLPPTFDTSLSITKLFLDNCSKLSKLPGNLGLLSTLNKLSLRGSNIENLPDSIKNLSQLRALNVSNCRRLRSLPELPFFLQDLNASNCVSLETVSNLGITLVQDSFDRLKKRSLLRQIQEEEKMSIRHRKYLGRFEFYNCIKLDQIARKTVMEEALIRIKLAAYLSSKIEKICDPYFQTDDPEDFIYVSLPVYIILPGSEVPNWFIHKITDSSTVKLFARWYHCCSDMGFAFYLVLGPMHSNGEKNHHIRFEAGCRYYFDDKYVGTCMINSSCNNAESDQVWLWYDKLKVVEGTSDENPQQVSFEFFVLPQSSGLVVKQCGVRPLYAADVIMRSSNEQEGNREDKRPYIESETSGIESKYQFSRQYDLPLSGSERQRIPGYRSGQSGISFSSVYPANVSQLIMKHDRFRYGDVVCVGFNIYDDHHHRAALRCLAQMLLDDYCYLGKLTDNINILSSIVCLSIYRCNVESLPASIEHLSWLKHISLRECKRLRSLPKLPLSLQFLVADNCPSLETVEFAQAKKLTFFGNSYEVKKISGNLIYEKVSKIELIDPETRVTNWTLLTSSYDSIFVGFNVASHIELWNVNWLSCEQFRLQDWETENATLLHAGRLLHQFSADGYTLIESPTFAMYGVQADAVLLALQARLKSVITLKGKVDEKEEEAKAKSMWDCGSPLYDSYELVSLDHLIDRHLMTLPSLHGSYALCDSTESCVDKLKSCGAEVLTFAAMF 1461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00019 1461 SUPERFAMILY L domain-like 534 832 - -
Gabi4981g00019 1461 Pfam TIR domain 15 185 IPR000157 GO:0007165
Gabi4981g00019 1461 Gene3D Ribonuclease Inhibitor 699 852 IPR032675 -
Gabi4981g00019 1461 Gene3D Ribonuclease Inhibitor 523 698 IPR032675 -
Gabi4981g00019 1461 Gene3D Ribonuclease Inhibitor 1149 1273 IPR032675 -
Gabi4981g00019 1461 PRINTS Disease resistance protein signature 213 228 - -
Gabi4981g00019 1461 PRINTS Disease resistance protein signature 289 303 - -
Gabi4981g00019 1461 PRINTS Disease resistance protein signature 626 642 - -
Gabi4981g00019 1461 PRINTS Disease resistance protein signature 381 395 - -
Gabi4981g00019 1461 Pfam Leucine Rich Repeat 607 626 IPR011713 -
Gabi4981g00019 1461 SUPERFAMILY "Winged helix" DNA-binding domain 417 522 IPR036390 -
Gabi4981g00019 1461 SUPERFAMILY Toll/Interleukin receptor TIR domain 3 156 IPR035897 -
Gabi4981g00019 1461 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
Gabi4981g00019 1461 SUPERFAMILY L domain-like 1174 1272 - -
Gabi4981g00019 1461 Gene3D - 184 338 IPR027417 -
Gabi4981g00019 1461 Pfam NB-ARC domain 197 416 IPR002182 GO:0043531
Gabi4981g00019 1461 Gene3D - 12 183 IPR035897 -
Gabi4981g00019 1461 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 181 - -
Gabi4981g00019 1461 Pfam C-JID domain 929 1063 IPR045344 -
Gabi4981g00019 1461 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 716 IPR044974 GO:0006952
Gabi4981g00019 1461 Gene3D - 346 430 IPR042197 -
Gabi4981g00019 1461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 440 IPR027417 -
Gabi4981g00019 1461 SMART till_3 13 153 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00019 Gabi-Chr4981 228413 248641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00019 15 818 WRKY Transcription Factor Family AT4G12020 35.828 1.01e-123 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00019 - - tpra:123891409 1625.53