Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00009 ATGGGAGAGGACATGGAGAGGGAACAAGTTTGTATAATTGGTGAGCTAATGCAAGGGAAGGAGCTAGCAAAGCAACTCTGTGATCATCTAGTTTCTTCTTCTTCTTCTTCTTCATCATCATCATCACCATCATCCCATGAAAAGAATGAAGTCTTAATTCAGAAAATACTTTCTACCTATGAGAAAGTACTCACCAAGTTGAATTGGAGTTCTGAAGTGGGAGAAAGTAAGAACAACAATGTCAACATGATGGATTCCCATTGTTCTTTTACAAATGGGAGCCCCAGAAGTGAGGTCCTGGACCCAGATGTTAAGCACAAAGATGTCTTCAAGAAAAGAAAGACCATGCCCAGATGGACAGAACATGTGAAGGTATGCTCAAGAACAGTGCTTGAAGGGTCTCAGGATGATGGTTATAGCTGGAGAAAATATGGGCAGAAGGATATTCTTGGATCTAAGTTTCCAAGAGGATATTTCAGATGCACACATAGAAATGTACGAGGGTGTCTGGCTACTAAGCAAGTGCAAAAGTCAGATGAAGACCCAACAATATTAGAGATAACCTACAGAGGAAGACACACATGCACTCAAGCAAGTCATTTAAACAAGGCATCCCCATCAAAAACAAAGATGGACTTGGGAGAAAATAAACTCCAAACAAATCAAAAGAATCAACCACAAGAAGGGAAAATAGAACCACCCCAAGAGACAATTTTCTCTTTTGGTTCTGAATTTGAAGTTAAAATGGAGGACTTTGACAACAAGGAGGAAATCTTCCCATCATTTTCCTTTCATTCTTCATCAATAGGATCTGAAAATGATGACAACAACATATTCTCCAAGACCATGATTGAAAACCCTTTCATGGAAAGCTTTTCTTCTCCATTCATATCACCAGAGACTTCAGAATCAAACATCTTCTGTTGGTCACCATGCCACTTAGGCAGCATAGGACTAGGCCATAGTGTGCAAACCTCAGAGTCTGATATCAATGAGATAGTTTCAGCCCCAACTTCAGTCACCAATTCTCCAATAATAGATTTTGATCTCCTCCTTGATAAGATAGATTTCGACACAGATTTCCCTATCAACACCCCAGAACTTTTCTCTTGA 1113 0.3971 MGEDMEREQVCIIGELMQGKELAKQLCDHLVSSSSSSSSSSSPSSHEKNEVLIQKILSTYEKVLTKLNWSSEVGESKNNNVNMMDSHCSFTNGSPRSEVLDPDVKHKDVFKKRKTMPRWTEHVKVCSRTVLEGSQDDGYSWRKYGQKDILGSKFPRGYFRCTHRNVRGCLATKQVQKSDEDPTILEITYRGRHTCTQASHLNKASPSKTKMDLGENKLQTNQKNQPQEGKIEPPQETIFSFGSEFEVKMEDFDNKEEIFPSFSFHSSSIGSENDDNNIFSKTMIENPFMESFSSPFISPETSESNIFCWSPCHLGSIGLGHSVQTSESDINEIVSAPTSVTNSPIIDFDLLLDKIDFDTDFPINTPELFS 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00009 370 SMART WRKY_cls 135 197 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4981g00009 370 SUPERFAMILY WRKY DNA-binding domain 134 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4981g00009 370 Gene3D WRKY domain 120 190 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gabi4981g00009 370 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 12 294 IPR044810 GO:0003700
Gabi4981g00009 370 FunFam WRKY transcription factor 53 121 198 - -
Gabi4981g00009 370 ProSiteProfiles WRKY domain profile. 136 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gabi4981g00009 370 Pfam WRKY DNA -binding domain 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00009 Gabi-Chr4981 120968 123825 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00009 2 259 WRKY Transcription Factor Family AT4G23810 38.790 1.40e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gabi4981g00009 WRKY 1.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00009 - - aprc:113849885 525.013