Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4981g00007 ATGGAGGCCCTCAATGCTGTTGGATTGAACCCTCTATCTGTTCTTTCTGATAGAAGAAAACAACCCAGAAAATTCCCTTCACTGCCCACAATTTCTGCATGCAAAGTTACAAACTTTTCTAGTTTTAGCAACAGGAAACAGGCACTGCAAGAGCGGTTATCAAGGGGTTTGCATGAGGGTCTATTTCTTGCAACTTCTTCAGTTGTAAATGGTGGAGTTGCTAGAGCTTTAACTTATGAGGAAGCATTGGGGAAATCTTTGAGTGCACCTAGTTCTGGGGACTTTGATGCAAATGGGTTTGTGGATAGTGTTATAAGTTTTGCAACAGAGAACCCAGCAATTCTTGCTGGAGGAGTAGCTGTTTTGGTAGTGCCACTTGTTTTGTTTCAGGTTCTGAAGAAGCCTAAGCCATGGGGTGTTGAATCAGCCAAAAATGCATATGCAAAACTGGGTGCTGATGGAAATGCTCAATTGCTTGATGTAAGAGCACCTATAGAGATTAGACAAGTGGGTACCCCAGATGTTGGGGGTCTGAGGAAGAAACCTGTGTCAATAGCTTACAAGAGTGATGATAAGCCAGGGTTCTTAAAGAAGATTTCATTGAAGTTCAAGGAACCAGAGAATACCACATTGTTCATTCTGGACAAATTTGATGGGAACTCTGAACTGGTTGCAGAGTTGGTCACCTTTAACGGATTTAAAGCTGCATATGCAATTAAGGATGGTGCTGAAGGACCACGAGGATGGATGAATAGTGGTCTTCCTTGGATAGCACCAAGGAAAGCATTGAGTTTGGATTTTGGCAATCTGACAGATGCTATCACTGATGCAATAGGAGATACCTCTGATGGCTTGGCTGTTACTCTTGGGATTGCTGCAGCTACTGGACTCGGTCTATTAGCTTTTTCTGAGATAGAAACAATTCTCCAACTTGTAGGATCTGCTGCACTTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCTGAGGACCGAAGGCAAACACTACAACAGGTTGATGAGTTCTTGAACACCAAGGTTGCCCCTAAAGAGCTTGTTGATGAAATACAGGAAATTGGAAAGGCTCTTCTACCAGCCTCCACCAATAATAAGGCTCTTCCTGTTCCAACAGAAAAAAGTCCAGAGCTTGATGCAGCTGATAGCACCGTACAGAAAGCTGAAGCTACTCCTGACAGTGTCACCGAGTCCAAAGTAGATGCTGTAGCAGCACCTGAAATAAACTCGGTGCCCACAACTGAAAATAAGGCAGAATCACTTCCTGTGCTACCAAAACCACTTTCACCATACCCATACTATCCAGATTACAAGCCTCCAACATCTCCTACACCTTCACAGCCTTAG 1359 0.4356 MEALNAVGLNPLSVLSDRRKQPRKFPSLPTISACKVTNFSSFSNRKQALQERLSRGLHEGLFLATSSVVNGGVARALTYEEALGKSLSAPSSGDFDANGFVDSVISFATENPAILAGGVAVLVVPLVLFQVLKKPKPWGVESAKNAYAKLGADGNAQLLDVRAPIEIRQVGTPDVGGLRKKPVSIAYKSDDKPGFLKKISLKFKEPENTTLFILDKFDGNSELVAELVTFNGFKAAYAIKDGAEGPRGWMNSGLPWIAPRKALSLDFGNLTDAITDAIGDTSDGLAVTLGIAAATGLGLLAFSEIETILQLVGSAALVQFASKKLLFAEDRRQTLQQVDEFLNTKVAPKELVDEIQEIGKALLPASTNNKALPVPTEKSPELDAADSTVQKAEATPDSVTESKVDAVAAPEINSVPTTENKAESLPVLPKPLSPYPYYPDYKPPTSPTPSQP 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4981g00007 452 MobiDBLite consensus disorder prediction 368 452 - -
Gabi4981g00007 452 MobiDBLite consensus disorder prediction 429 452 - -
Gabi4981g00007 452 Gene3D - 138 268 IPR036873 -
Gabi4981g00007 452 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 136 267 - -
Gabi4981g00007 452 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 136 257 IPR036873 -
Gabi4981g00007 452 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 452 IPR044240 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4981g00007 Gabi-Chr4981 87605 92362 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4981g00007 1 442 Sulfurtransferasese or Rhodanese AT4G01050 55.769 7.92e-156 449
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4981g00007 K17525 - gmx:100810796 597.43